RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 GALNTL5Q7Z4T8 443 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 GOLGA7Q7Z5G4 137 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 HOGA1Q86XE5 327 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 SIAH3Q8IW03 269 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 IFT20Q8IY31 132 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 DND1Q8IYX4 353 aaKnown RBP3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 ST13P4Q8IZP2 240 aaPredicted RBP3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 KIF2BQ8N4N8 673 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 ZNF614Q8N883 585 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 SNX31Q8N9S9 440 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 ZNF485Q8NCK3 441 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 OR5L2Q8NGL0 311 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 OR10G8Q8NGN5 311 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 ACMSDQ8TDX5 336 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 ZNF721Q8TF20 911 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 PHF10Q8WUB8 498 aaKnown RBP3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 NCLNQ969V3 563 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 ANKRD9Q96BM1 317 aaPredicted RBP3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 FAM71F1Q96KD3 344 aaPredicted RBP3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 GPR137Q96N19 417 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 MUS81Q96NY9 551 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 SERPINI1Q99574 410 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 MAPKAP1Q9BPZ7 522 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 CCDC77Q9BR77 488 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 CLEC7AQ9BXN2 247 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 OR51B5Q9H339 312 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 RPF2Q9H7B2 306 aaKnown RBP3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 Q9H8V8 135 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 ACTR8Q9H981 624 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 COPS7BQ9H9Q2 264 aaPredicted RBP3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 CDH20Q9HBT6 801 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 LYARQ9NX58 379 aaKnown RBP3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 SEC14L3Q9UDX4 400 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 PCTPQ9UKL6 214 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 KLF13Q9Y2Y9 288 aaPredicted RBP3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 ASB4Q9Y574 426 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 ANGPTL3Q9Y5C1 460 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 KLF2Q9Y5W3 355 aaPredicted RBP3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 IKBKGQ9Y6K9 419 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 CLCA3PQ9Y6N3 262 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 NBPF19A0A087WUL8 3843 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 MED12Q93074 2177 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 A0A0G2JN53 185 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 TRBV11-1A0A0K0K1C0 115 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 IQANK1A0A1B0GTG1 560 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 EXOC1LA0A1B0GW35 172 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 A0A1W2PPK0 400 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 A8MT66 165 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 A8MUA0 341 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 C17orf105B2RV13 164 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 TRIM49D1C9J1S8 452 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 H3BQF6 201 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 RTCAO00442 366 aaKnown RBP3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 RIPK2O43353 540 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 SLC19A2O60779 497 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 SMIM24O75264 130 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 GLSO94925 669 aaPredicted RBP3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 ETHE1O95571 254 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 GPR75O95800 540 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 OTCP00480 354 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 F10P00742 488 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 IGHG3P01860 377 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 GSTA1P08263 222 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 FAM58BPP0C7Q3 252 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 SLC35E2P0CK97 266 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 ZNF24P17028 368 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 IMPDH1P20839 514 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 CNR1P21554 472 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 CPN2P22792 545 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 EEF1B2P24534 225 aaKnown RBP3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 AZGP1P25311 298 aaKnown RBP3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 KRT20P35900 424 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 HSD17B3P37058 310 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 SSR2P43308 183 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 SSR4P51571 173 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 CCNG1P51959 295 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 RAP1GDS1P52306 607 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 KCNK10P57789 538 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 TRA2BP62995 288 aaKnown RBP3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 HERVK_113P63132 956 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 FOLH1Q04609 750 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 ACSM1Q08AH1 577 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 FUT7Q11130 342 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 UAP1Q16222 522 aaPredicted RBP3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 ZNF791Q3KP31 576 aaPredicted RBP3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 PIGGQ5H8A4 983 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 CST9LP1Q5W188 147 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 KRT80Q6KB66 452 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 SLC30A6Q6NXT4 461 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 OPN5Q6U736 354 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 DCHS2Q6V1P9 2916 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 RTL4Q6ZR62 310 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 BTN2A1Q7KYR7 527 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 PAGE2Q7Z2X7 111 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 SLC22A9Q8IVM8 553 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 CYP4Z2PQ8N1L4 340 aa3.06□□□□□ -1.92
CKS1BP3-201ENST00000600888 METTL4Q8N3J2 472 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms