RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 MDP1Q86V88 176 aa16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 FBXL14Q8N1E6 418 aa16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 ANKS4BQ8N8V4 417 aa16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 MOSPD2Q8NHP6 518 aa16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 ZNF566Q969W8 418 aa16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 COX4I2Q96KJ9 171 aa16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 FNDC11Q9BVV2 318 aa16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 MRPL13Q9BYD1 178 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 MOV10Q9HCE1 1003 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 DCAF13Q9NV06 445 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 ZNF224Q9NZL3 707 aa16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 TAGLN3Q9UI15 199 aa16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 GDF2Q9UK05 429 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 POFUT2Q9Y2G5 429 aa16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 CSPG4Q6UVK1 2322 aa16.07■□□□□ 0.16
SHKBP1-202ENST00000593764 HTR3EA5X5Y0 456 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 H7C1Q1 480 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 IGHV4-39P01824 125 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 HLA-HP01893 362 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 B4GALT1P15291 398 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 MAKP20794 623 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 APOBEC3AP31941 199 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 IFNA8P32881 189 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 FHL1Q13642 323 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 TRAM2Q15035 370 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 FXNQ16595 210 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 HIST3H3Q16695 136 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 MST1LQ2TV78 715 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 FAM156AQ8NDB6 213 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 BPIFA2Q96DR5 249 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 ZNF75AQ96N20 296 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 CCT8L2Q96SF2 557 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 SEPHS2Q99611 448 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 FOXB1Q99853 325 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 BDH2Q9BUT1 245 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 NOX3Q9HBY0 568 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 INIPQ9NRY2 104 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 CD300AQ9UGN4 299 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 ENPP4Q9Y6X5 453 aa16.06■□□□□ 0.16
SHKBP1-202ENST00000593764 ARFGEF3Q5TH69 2177 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 A0A087WUU8 490 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 A0A1W2PRG6 482 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 DCTN3O75935 186 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 CRYAAP02489 173 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 IFI30P13284 250 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 HSD17B1P14061 328 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 ARR3P36575 388 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 IDH3GP51553 393 aaPredicted RBP16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 HGFACQ04756 655 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 PRKCDQ05655 676 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 ARMC4Q5T2S8 1044 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 TBPL2Q6SJ96 375 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 BIVMQ86UB2 503 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 MEX3DQ86XN8 651 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 NRMQ8IXM6 262 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 PGAM4Q8N0Y7 254 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 FAM86B1Q8N7N1 296 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 ASB10Q8WXI3 467 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 C7orf34Q96L11 122 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 CACNG6Q9BXT2 260 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 GORASP2Q9H8Y8 452 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 NMNAT1Q9HAN9 279 aaPredicted RBP16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 NDUFAF4Q9P032 175 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 RPS6KA6Q9UK32 745 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 HIF3AQ9Y2N7 669 aa16.05■□□□□ 0.16
SHKBP1-202ENST00000593764 DHHO43323 396 aa16.04■□□□□ 0.16
SHKBP1-202ENST00000593764 IGHG1P01857 330 aa16.04■□□□□ 0.16
SHKBP1-202ENST00000593764 QDPRP09417 244 aa16.04■□□□□ 0.16
SHKBP1-202ENST00000593764 TCN1P20061 433 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-202ENST00000593764 ACVR1BP36896 505 aa16.04■□□□□ 0.16
SHKBP1-202ENST00000593764 CAPZA2P47755 286 aa16.04■□□□□ 0.16
SHKBP1-202ENST00000593764 TNK1Q13470 666 aa16.04■□□□□ 0.16
SHKBP1-202ENST00000593764 ETFDHQ16134 617 aa16.04■□□□□ 0.16
SHKBP1-202ENST00000593764 SWI5Q1ZZU3 235 aa16.04■□□□□ 0.16
SHKBP1-202ENST00000593764 CLEC12BQ2HXU8 276 aa16.04■□□□□ 0.16
SHKBP1-202ENST00000593764 DNM1P46Q6ZS02 220 aa16.04■□□□□ 0.16
SHKBP1-202ENST00000593764 PIWIL3Q7Z3Z3 882 aaKnown RBP16.04■□□□□ 0.16
SHKBP1-202ENST00000593764 RNF113BQ8IZP6 322 aaKnown RBP16.04■□□□□ 0.16
SHKBP1-202ENST00000593764 FITM2Q8N6M3 262 aa16.04■□□□□ 0.16
SHKBP1-202ENST00000593764 FGFBP3Q8TAT2 258 aa16.04■□□□□ 0.16
SHKBP1-202ENST00000593764 ACOT11Q8WXI4 607 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-202ENST00000593764 ZNF347Q96SE7 839 aa16.04■□□□□ 0.16
SHKBP1-202ENST00000593764 CDRT15Q96T59 188 aa16.04■□□□□ 0.16
SHKBP1-202ENST00000593764 KCNS3Q9BQ31 491 aa16.04■□□□□ 0.16
SHKBP1-202ENST00000593764 TLN2Q9Y4G6 2542 aa16.04■□□□□ 0.16
SHKBP1-202ENST00000593764 IGHV2OR16-5A0A0B4J2B6 119 aa16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 NPIPB13A6NJU9 1138 aa16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 NPIPB4C9JG80 1138 aa16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 TRMUO75648 421 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 CD79AP11912 226 aa16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 ACADSP16219 412 aa16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 MSX2P35548 267 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 RIPPLY3P57055 190 aa16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 PIGFQ07326 219 aa16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 NPRL3Q12980 569 aa16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 GSG1Q2KHT4 349 aa16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 IQCCQ4KMZ1 466 aa16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 MBOAT2Q6ZWT7 520 aa16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 SKA3Q8IX90 412 aa16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 LRRC75AQ8NAA5 344 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms