RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 FOSL1P15407 271 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 TTKP33981 857 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 PTH2RP49190 550 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 LSM11P83369 360 aaKnown RBP eCLIP12.17□□□□□ -0.46
GGA3-215ENST00000582821 FOXD4Q12950 439 aaPredicted RBP12.17□□□□□ -0.46
GGA3-215ENST00000582821 DGCR6Q14129 220 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 LAPTM4AQ15012 233 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 TAF11Q15544 211 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 IQCCQ4KMZ1 466 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 ZNF544Q6NX49 715 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 LRFN4Q6PJG9 635 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 TMPRSS11FQ6ZWK6 438 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 MBOAT2Q6ZWT7 520 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 HDDC2Q7Z4H3 204 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 NRMQ8IXM6 262 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 DEFB107AQ8IZN7 70 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 ARHGAP24Q8N264 748 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 FAM156AQ8NDB6 213 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 RBM15BQ8NDT2 890 aaKnown RBP12.17□□□□□ -0.46
GGA3-215ENST00000582821 PYURFQ96I23 114 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 FOXB1Q99853 325 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 TRAF4Q9BUZ4 470 aaPredicted RBP12.17□□□□□ -0.46
GGA3-215ENST00000582821 KATNB1Q9BVA0 655 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 DENND2DQ9H6A0 471 aaPredicted RBP12.17□□□□□ -0.46
GGA3-215ENST00000582821 DLL4Q9NR61 685 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 B3GNT2Q9NY97 397 aa12.17□□□□□ -0.46
GGA3-215ENST00000582821 STX18Q9P2W9 335 aaKnown RBP12.17□□□□□ -0.46
GGA3-215ENST00000582821 FAM32AQ9Y421 112 aaKnown RBP12.17□□□□□ -0.46
GGA3-215ENST00000582821 SETD2Q9BYW2 2564 aaPredicted RBP12.17□□□□□ -0.46
GGA3-215ENST00000582821 IGHV1-18A0A0C4DH31 117 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 MGRN1O60291 552 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 IGHG1P01857 330 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 SEMG1P04279 462 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 F13BP05160 661 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 H1F0P07305 194 aaKnown RBP12.16□□□□□ -0.46
GGA3-215ENST00000582821 ITGA2P17301 1181 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 TCN1P20061 433 aaPredicted RBP12.16□□□□□ -0.46
GGA3-215ENST00000582821 MAKP20794 623 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 ARR3P36575 388 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 SLC9A3P48764 834 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 DAP3P51398 398 aaKnown RBP12.16□□□□□ -0.46
GGA3-215ENST00000582821 ZNF133P52736 654 aaPredicted RBP12.16□□□□□ -0.46
GGA3-215ENST00000582821 SPOCK1Q08629 439 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 FHL1Q13642 323 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 Q5PR19 223 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 ARMC4Q5T2S8 1044 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 AGAP6Q5VW22 663 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 TBPL2Q6SJ96 375 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 B3GLCTQ6Y288 498 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 ZNF730Q6ZMV8 503 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 PIWIL3Q7Z3Z3 882 aaKnown RBP12.16□□□□□ -0.46
GGA3-215ENST00000582821 CDK20Q8IZL9 346 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 FAM86B1Q8N7N1 296 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 LRRC75AQ8NAA5 344 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 IL17RDQ8NFM7 739 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 MOSPD2Q8NHP6 518 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 SLC7A13Q8TCU3 470 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 ASB10Q8WXI3 467 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 PERPQ96FX8 193 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 DHRS1Q96LJ7 313 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 NSMCE2Q96MF7 247 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 TXNIPQ9H3M7 391 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 POU2F3Q9UKI9 436 aa12.16□□□□□ -0.46
GGA3-215ENST00000582821 ZNF503-AS2A6NEH8 195 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 ARPC2O15144 300 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 DHHO43323 396 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 ENTPD5O75356 428 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 CRYAAP02489 173 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 CECR9P0C854 216 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 T-ENOLP0DO92 83 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 ACADSP16219 412 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 CALB2P22676 271 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 APOBEC3AP31941 199 aaPredicted RBP12.15□□□□□ -0.46
GGA3-215ENST00000582821 MSX2P35548 267 aaPredicted RBP12.15□□□□□ -0.46
GGA3-215ENST00000582821 TUBA1BP68363 451 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 TUBA4AP68366 448 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 MXRA7P84157 204 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 VLDLRP98155 873 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 NAAAQ02083 359 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 RUNX1T1Q06455 604 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 MELKQ14680 651 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 NRN1LQ496H8 165 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 ALG10Q5BKT4 473 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 ZNF813Q6ZN06 617 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 TUBA1AQ71U36 451 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 RRM2BQ7LG56 351 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 TRMT61AQ96FX7 289 aaKnown RBP12.15□□□□□ -0.46
GGA3-215ENST00000582821 ZNF75AQ96N20 296 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 CBLN4Q9NTU7 201 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 MOKQ9UQ07 419 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 ATP23Q9Y6H3 246 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 CSPG4Q6UVK1 2322 aa12.15□□□□□ -0.46
GGA3-215ENST00000582821 EFCAB9A8MZ26 197 aa12.14□□□□□ -0.47
GGA3-215ENST00000582821 ATP6V1G2-DDX39BF2Z307 99 aa12.14□□□□□ -0.47
GGA3-215ENST00000582821 TRMUO75648 421 aaKnown RBP12.14□□□□□ -0.47
GGA3-215ENST00000582821 IGHMP01871 453 aa12.14□□□□□ -0.47
GGA3-215ENST00000582821 QDPRP09417 244 aa12.14□□□□□ -0.47
GGA3-215ENST00000582821 SAGP10523 405 aaPredicted RBP12.14□□□□□ -0.47
GGA3-215ENST00000582821 FABP6P51161 128 aa12.14□□□□□ -0.47
GGA3-215ENST00000582821 ATP5J2P56134 94 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms