RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 ZFP64Q9NPA5 681 aa4.3□□□□□ -1.72
GAPLINC-202ENST00000579007 ACKR4Q9NPB9 350 aa4.3□□□□□ -1.72
GAPLINC-202ENST00000579007 HINT3Q9NQE9 182 aaKnown RBP4.3□□□□□ -1.72
GAPLINC-202ENST00000579007 IL20Q9NYY1 176 aa4.3□□□□□ -1.72
GAPLINC-202ENST00000579007 OPTCQ9UBM4 332 aa4.3□□□□□ -1.72
GAPLINC-202ENST00000579007 RNF14Q9UBS8 474 aa4.3□□□□□ -1.72
GAPLINC-202ENST00000579007 B4GALT7Q9UBV7 327 aa4.3□□□□□ -1.72
GAPLINC-202ENST00000579007 GAGE2DQ9UEU5 116 aa4.3□□□□□ -1.72
GAPLINC-202ENST00000579007 PHF11Q9UIL8 331 aa4.3□□□□□ -1.72
GAPLINC-202ENST00000579007 BOKQ9UMX3 212 aaPredicted RBP4.3□□□□□ -1.72
GAPLINC-202ENST00000579007 C15orf41Q9Y2V0 281 aa4.3□□□□□ -1.72
GAPLINC-202ENST00000579007 SLC6A5Q9Y345 797 aa4.3□□□□□ -1.72
GAPLINC-202ENST00000579007 ROS1P08922 2347 aa4.3□□□□□ -1.72
GAPLINC-202ENST00000579007 SONP18583 2426 aaKnown RBP4.3□□□□□ -1.72
GAPLINC-202ENST00000579007 TRGV11A0A075B6L2 103 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 PRR23D1E9PI22 279 aaPredicted RBP4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 EIF3HO15372 352 aaKnown RBP eCLIP4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 ARHGEF9O43307 516 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 XRCC3O43542 346 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 CSTAP01040 98 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 IGHV2-70P01814 119 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 MT-ND1P03886 318 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 HPNP05981 417 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 SFTPBP07988 381 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 PABPC4LP0CB38 370 aaKnown RBP4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 PRR23D2P0DMB1 279 aaPredicted RBP4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 CD99P14209 185 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 GABRA1P14867 456 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 ZNF44P15621 663 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 PRKACAP17612 351 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 S1PR1P21453 382 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 MPZP25189 248 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 SERPINB1P30740 379 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 MAGEA12P43365 314 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 CDK9P50750 372 aaKnown RBP4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 PPT1P50897 306 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 RAP1GDS1P52306 607 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 MAPK12P53778 367 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 CLDN8P56748 225 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 GNG11P61952 73 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 SRSF3P84103 164 aaKnown RBP4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 GUCY2DQ02846 1103 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 TGM3Q08188 693 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 FUT7Q11130 342 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 FOXF2Q12947 444 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 SLC10A1Q14973 349 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 LTB4RQ15722 352 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 PCK2Q16822 640 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 CTU2Q2VPK5 515 aaKnown RBP4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 GPAT3Q53EU6 434 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 GGNBP1Q5YKI7 109 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 SLC22A10Q63ZE4 541 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 OR52E8Q6IFG1 317 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 METTL2BQ6P1Q9 378 aaKnown RBP4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 ERICH5Q6P6B1 374 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 SLC29A4Q7RTT9 530 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 LACC1Q8IV20 430 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 CTAGE3PQ8IX95 158 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 PARP16Q8N5Y8 322 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 TRIML2Q8N7C3 387 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 SCCPDHQ8NBX0 429 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 FAM83FQ8NEG4 500 aaPredicted RBP4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 SPATA4Q8NEY3 305 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 BPIFCQ8NFQ6 507 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 OR5L2Q8NGL0 311 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 VANGL1Q8TAA9 524 aaPredicted RBP4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 TRMT10AQ8TBZ6 339 aaKnown RBP4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 FBXO25Q8TCJ0 367 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 PYROXD1Q8WU10 500 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 LIPHQ8WWY8 451 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 RNASE6Q93091 150 aaKnown RBP4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 HGDQ93099 445 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 MBD6Q96DN6 1003 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 METTL2AQ96IZ6 378 aaKnown RBP4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 FAM71F1Q96KD3 344 aaPredicted RBP4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 ART5Q96L15 291 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 JSRP1Q96MG2 331 aaPredicted RBP4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 NODALQ96S42 347 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 MNTQ99583 582 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 GFI1Q99684 422 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 TIMP4Q99727 224 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 GATA5Q9BWX5 397 aaPredicted RBP4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 PINK1Q9BXM7 581 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 NXF5Q9H1B4 397 aaKnown RBP4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 AUNIPQ9H7T9 357 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 DDX31Q9H8H2 851 aaKnown RBP4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 PLEKHF2Q9H8W4 249 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 MED20Q9H944 212 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 CXorf21Q9HAI6 301 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 GALNT9Q9HCQ5 603 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 ACSS1Q9NUB1 689 aaPredicted RBP4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 LYARQ9NX58 379 aaKnown RBP4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 MAT2BQ9NZL9 334 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 EHD3Q9NZN3 535 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 TXNDC16Q9P2K2 825 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 CLCF1Q9UBD9 225 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 PCTPQ9UKL6 214 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 RNF11Q9Y3C5 154 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 TSC22D4Q9Y3Q8 395 aa4.29□□□□□ -1.72
GAPLINC-202ENST00000579007 SAR1BQ9Y6B6 198 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms