RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 ZNF7P17097 686 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 PRPS1L1P21108 318 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 CALCRP30988 508 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 EPHX2P34913 555 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 CEACAM3P40198 252 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 RFC3P40938 356 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 RFX2P48378 723 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 ATP4BP51164 291 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 PRELPP51888 382 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 NKX2-5P52952 324 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 TAS2R39P59534 338 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 ACTBP60709 375 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 UBE2MP61081 183 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 ERVK11-1P61568 191 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 BTG1P62324 171 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 ACTA2P62736 377 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 ACTG1P63261 375 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 ACTG2P63267 376 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 ACTC1P68032 377 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 ACTA1P68133 377 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 CKAP4Q07065 602 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 BCL2L1Q07817 233 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 C2orf80Q0P641 193 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 FOXI1Q12951 378 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 TFDP2Q14188 446 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 DPYSL3Q14195 570 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 TMEM187Q14656 261 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 SPA17Q15506 151 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 ZNHIT3Q15649 155 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 ZBTB6Q15916 424 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 CYP51A1Q16850 503 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 RFX4Q33E94 735 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 RESP18Q5W5W9 173 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 OR52E8Q6IFG1 317 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 LINC00336Q6ZUF6 198 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 RBM23Q86U06 439 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 VKORC1L1Q8N0U8 176 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 METTL27Q8N6F8 245 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 VN1R2Q8NFZ6 395 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 OR5B17Q8NGF7 314 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 OR5D18Q8NGL1 313 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 OR1S2Q8NGQ3 325 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 OR2Y1Q8NGV0 311 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 OR4Q3Q8NH05 313 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 ACTL9Q8TC94 416 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 DNAJB3Q8WWF6 145 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 BAALCQ8WXS3 180 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 SORT1Q99523 831 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 RBBP8Q99708 897 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 HSD17B14Q9BPX1 270 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 MLST8Q9BVC4 326 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 TSGA10Q9BZW7 698 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 DSN1Q9H410 356 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 PLEKHA3Q9HB20 300 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 FOLH1BQ9HBA9 442 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 TMBIM4Q9HC24 238 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 BABAM2Q9NXR7 383 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 BTNL2Q9UIR0 455 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 GOLT1BQ9Y3E0 138 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 CSNK1G3Q9Y6M4 447 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 NEDD4P46934 1319 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 FANCIQ9NVI1 1328 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 ANKRD30BQ9BXX2 1392 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 ANKRD30AQ9BXX3 1397 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 GOLGA6L4A6NEF3 574 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 LINC01548A6NM66 108 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 PGRMC1O00264 195 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 ACOX3O15254 700 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 CRXO43186 299 aaPredicted RBP4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 MGRN1O60291 552 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 CDC40O60508 579 aaKnown RBP eCLIP4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 CLDN11O75508 207 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 SEC24AO95486 1093 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 PMS2P2O95744 297 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 PAK4O96013 591 aaPredicted RBP4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 GLUD1P00367 558 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 IFNA5P01569 189 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 HLA-AP01891 365 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 ORM1P02763 201 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 NHLRC4P0CG21 123 aaPredicted RBP4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 CDH1P12830 882 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 MYOGP15173 224 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 BCL3P20749 454 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 DDOSTP39656 456 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 MAGEA3P43357 314 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 KIR3DL2P43630 455 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 CSNK1A1P48729 337 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 CRISP1P54107 249 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 ERVK-16P61578 105 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 RPL8P62917 257 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 S100A12P80511 92 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 ZNF85Q03923 595 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 GABRA6Q16445 453 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 ECSCRQ19T08 205 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 ZNF260Q3ZCT1 412 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 SIRPB2Q5JXA9 342 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 PVRIGQ6DKI7 326 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 FRMPD2BQ6IN97 320 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 FRRS1Q6ZNA5 592 aa4.34□□□□□ -1.71
R3HDM1-216ENST00000483065 TMEM135Q86UB9 458 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms