RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 CAPZA2P47755 286 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 CLRN1P58418 232 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 RPS4XP62701 263 aaKnown RBP13.05□□□□□ -0.32
ATG4B-213ENST00000460211 NKX6-1P78426 367 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-213ENST00000460211 PRKCDQ05655 676 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 DGCR6Q14129 220 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 MELKQ14680 651 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 TAF11Q15544 211 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 C3orf36Q3SXR2 165 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 ALG10Q5BKT4 473 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 PHYHD1Q5SRE7 291 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 MBOAT2Q6ZWT7 520 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 OAFQ86UD1 273 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 KRTAP1-3Q8IUG1 177 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 FAM169BQ8N8A8 192 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 RBM15BQ8NDT2 890 aaKnown RBP13.05□□□□□ -0.32
ATG4B-213ENST00000460211 LILRB1Q8NHL6 650 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-213ENST00000460211 NANOS1Q8WY41 292 aaKnown RBP13.05□□□□□ -0.32
ATG4B-213ENST00000460211 MDFIQ99750 246 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 MAN2C1Q9NTJ4 1040 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 TMEM5Q9Y2B1 443 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 HIF3AQ9Y2N7 669 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 ATP23Q9Y6H3 246 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 V9GYQ6 96 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 DSCAMO60469 2012 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 ARID1AO14497 2285 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 A0A087WUU8 490 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 KIAA1324LA8MWY0 1029 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-213ENST00000460211 CENPBD1B2RD01 187 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 hCG_2039718K7EN88 272 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 PRSS23O95084 383 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 STAMBPO95630 424 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 CRYAAP02489 173 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 NR2C1P13056 603 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 ARR3P36575 388 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 SLC9A3P48764 834 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 LAPTM4AQ15012 233 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 FGD3Q5JSP0 725 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 AGAP6Q5VW22 663 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 ZNF813Q6ZN06 617 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 PRIMA1Q86XR5 153 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 NEUROG1Q92886 237 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 POP5Q969H6 163 aaKnown RBP13.04□□□□□ -0.32
ATG4B-213ENST00000460211 TMEM54Q969K7 222 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 GTPBP3Q969Y2 492 aaKnown RBP13.04□□□□□ -0.32
ATG4B-213ENST00000460211 ZNF837Q96EG3 531 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-213ENST00000460211 TRMT61AQ96FX7 289 aaKnown RBP13.04□□□□□ -0.32
ATG4B-213ENST00000460211 C7orf34Q96L11 122 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 SLC38A2Q96QD8 506 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 FOXB1Q99853 325 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 MUC13Q9H3R2 512 aa13.04□□□□□ -0.32
ATG4B-213ENST00000460211 FN1P02751 2386 aaKnown RBP13.04□□□□□ -0.32
ATG4B-213ENST00000460211 NPIPB13A6NJU9 1138 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 NPIPB4C9JG80 1138 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 DHHO43323 396 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 FARS2O95363 451 aaKnown RBP13.03□□□□□ -0.32
ATG4B-213ENST00000460211 LY6G6DO95868 133 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 HEXAP06865 529 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 TSPAN19P0C672 248 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 PGA4P0DJD7 388 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 PGA3P0DJD8 388 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 CBR1P16152 277 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 ACADSP16219 412 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 MAKP20794 623 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 VLDLRP98155 873 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 MTX3Q5HYI7 312 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 FAM205BPQ63HN1 556 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 TBPL2Q6SJ96 375 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 TMPRSS11FQ6ZWK6 438 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 ZNF627Q7L945 461 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 TRPM8Q7Z2W7 1104 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 PIWIL3Q7Z3Z3 882 aaKnown RBP13.03□□□□□ -0.32
ATG4B-213ENST00000460211 FBXL14Q8N1E6 418 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 FAM86B1Q8N7N1 296 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 IL17RDQ8NFM7 739 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 OR51A7Q8NH64 312 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 MOSPD2Q8NHP6 518 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 ASB10Q8WXI3 467 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 PERPQ96FX8 193 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 ZNF347Q96SE7 839 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 DHRS9Q9BPW9 319 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 KATNB1Q9BVA0 655 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 GSX2Q9BZM3 304 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 C1orf21Q9H246 121 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 TXNIPQ9H3M7 391 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 NELFAQ9H3P2 528 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 ACTR3BQ9P1U1 418 aa13.03□□□□□ -0.32
ATG4B-213ENST00000460211 PRPF19Q9UMS4 504 aaKnown RBP13.03□□□□□ -0.32
ATG4B-213ENST00000460211 JMJD1CQ15652 2540 aa13.02□□□□□ -0.32
ATG4B-213ENST00000460211 IGHV1-18A0A0C4DH31 117 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 VSTM5A8MXK1 200 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 SEC14L2O76054 403 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 FABP3P05413 133 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 QDPRP09417 244 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 DANCRP0C864 163 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 CD79AP11912 226 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 BMP4P12644 408 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 PCSK6P29122 969 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 PTH2RP49190 550 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 FABP6P51161 128 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms