RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 NANOS1Q8WY41 292 aaKnown RBP11.12□□□□□ -0.63
UBR4-205ENST00000417040 AMDHD1Q96NU7 426 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 TMEM43Q9BTV4 400 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 SPACA1Q9HBV2 294 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 TAS2R4Q9NYW5 299 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 TMEM202A6NGA9 273 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 PPP1R2P9O14990 202 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 RAF1P04049 648 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 THBS1P07996 1170 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 TRA2BP62995 288 aaKnown RBP11.12□□□□□ -0.63
UBR4-205ENST00000417040 ZFP62Q8NB50 900 aaPredicted RBP11.12□□□□□ -0.63
UBR4-205ENST00000417040 OR56B1Q8NGI3 324 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 MITD1Q8WV92 249 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 MAP6Q96JE9 813 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 PTTG3PQ9NZH4 202 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 PIAS3Q9Y6X2 628 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 HLA-DOBP13765 273 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 CPEP16870 476 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 GCH1P30793 250 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 BIDP55957 195 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 GGTA1PQ4G0N0 100 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 PRAMEF20Q5VT98 475 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 ACSM5Q6NUN0 579 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 OR2G3Q8NGZ4 309 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 DYNC2LI1Q8TCX1 351 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 SLC46A2Q9BY10 475 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 SPATA6Q9NWH7 488 aaPredicted RBP11.12□□□□□ -0.63
UBR4-205ENST00000417040 ASB1Q9Y576 335 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 TCRBV5S2A0A599 114 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 SYT5O00445 386 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 PMS2P2O95744 297 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 HOXD9P28356 352 aaPredicted RBP11.11□□□□□ -0.63
UBR4-205ENST00000417040 LAP3P28838 519 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 NPBWR1P48145 328 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 CCR9P51686 369 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 SLC35A2P78381 396 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 CTBSQ01459 385 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 B3GNT9Q6UX72 402 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 SLCO4C1Q6ZQN7 724 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 ZNF610Q8N9Z0 462 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 MSI2Q96DH6 328 aaKnown RBP11.11□□□□□ -0.63
UBR4-205ENST00000417040 ZNF75AQ96N20 296 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 NIPSNAP3BQ9BS92 247 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 AUNIPQ9H7T9 357 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 MED17Q9NVC6 651 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 A0A1B0GWA3 101 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 G0S2P27469 103 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 OR8G2PQ6IF36 304 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 OR1S2Q8NGQ3 325 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 MAP3K3Q99759 626 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 PTRH2Q9Y3E5 179 aaKnown RBP11.11□□□□□ -0.63
UBR4-205ENST00000417040 ZNF264O43296 627 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 IL2RGP31785 369 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 TSFMP43897 325 aaKnown RBP11.11□□□□□ -0.63
UBR4-205ENST00000417040 FABP6P51161 128 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 ASAH1Q13510 395 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 SLC10A1Q14973 349 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 PLAC9Q5JTB6 97 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 VHLLQ6RSH7 139 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 RDH10Q8IZV5 341 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 GMLQ99445 158 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 ENKD1Q9H0I2 346 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 ISG20L2Q9H9L3 353 aaKnown RBP11.11□□□□□ -0.63
UBR4-205ENST00000417040 FN3KRPQ9HA64 309 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 ACSS1Q9NUB1 689 aaPredicted RBP11.11□□□□□ -0.63
UBR4-205ENST00000417040 PISDQ9UG56 409 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 NUMBLQ9Y6R0 609 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 V9GYS6 101 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 SLC5A10A0PJK1 596 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 H0YIV9 168 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 ADAM23O75077 832 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 GPR75O95800 540 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 AADACP22760 399 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 CARD18P57730 90 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 FABP5Q01469 135 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 DSC1Q08554 894 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 TMEM176BQ3YBM2 270 aaPredicted RBP11.11□□□□□ -0.63
UBR4-205ENST00000417040 PRSS36Q5K4E3 855 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 GLIPR1L1Q6UWM5 242 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 MKXQ8IYA7 352 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 RNF113BQ8IZP6 322 aaKnown RBP11.11□□□□□ -0.63
UBR4-205ENST00000417040 ULBP2Q9BZM5 246 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 C1orf198Q9H425 327 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 HRASLSQ9HDD0 168 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 GPR55Q9Y2T6 319 aaPredicted RBP11.11□□□□□ -0.63
UBR4-205ENST00000417040 LAMA4Q16363 1823 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 PIGBOS1A0A0B4J2F0 54 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 ZBTB42B2RXF5 422 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 TEAD1P28347 426 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 HENMT1Q5T8I9 393 aaKnown RBP11.11□□□□□ -0.63
UBR4-205ENST00000417040 DCXRQ7Z4W1 244 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 MARCH3Q86UD3 253 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 TMED6Q8WW62 240 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 YIPF6Q96EC8 236 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 UHRF2Q96PU4 802 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 ANKRD19PQ9H560 264 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 CUTCQ9NTM9 273 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 ACER3Q9NUN7 267 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 TAS2R5Q9NYW4 299 aa11.11□□□□□ -0.63
UBR4-205ENST00000417040 OR2T1O43869 369 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms