RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 RPL18Q07020 188 aaKnown RBP14.73□□□□□ -0.05
BRCC3-202ENST00000340647 LOXL1Q08397 574 aaPredicted RBP14.73□□□□□ -0.05
BRCC3-202ENST00000340647 NPRL3Q12980 569 aa14.73□□□□□ -0.05
BRCC3-202ENST00000340647 FHL1Q13642 323 aa14.73□□□□□ -0.05
BRCC3-202ENST00000340647 ERICH5Q6P6B1 374 aa14.73□□□□□ -0.05
BRCC3-202ENST00000340647 CXXC5Q7LFL8 322 aaKnown RBP14.73□□□□□ -0.05
BRCC3-202ENST00000340647 TSEN54Q7Z6J9 526 aaKnown RBP14.73□□□□□ -0.05
BRCC3-202ENST00000340647 MICU2Q8IYU8 434 aa14.73□□□□□ -0.05
BRCC3-202ENST00000340647 OR4F15Q8NGB8 312 aa14.73□□□□□ -0.05
BRCC3-202ENST00000340647 SPATA3Q8NHX4 192 aa14.73□□□□□ -0.05
BRCC3-202ENST00000340647 RASSF5Q8WWW0 418 aa14.73□□□□□ -0.05
BRCC3-202ENST00000340647 LIPHQ8WWY8 451 aa14.73□□□□□ -0.05
BRCC3-202ENST00000340647 FOXB1Q99853 325 aa14.73□□□□□ -0.05
BRCC3-202ENST00000340647 ULBP2Q9BZM5 246 aa14.73□□□□□ -0.05
BRCC3-202ENST00000340647 ZNF442Q9H7R0 627 aa14.73□□□□□ -0.05
BRCC3-202ENST00000340647 MAN2C1Q9NTJ4 1040 aa14.73□□□□□ -0.05
BRCC3-202ENST00000340647 GLTPQ9NZD2 209 aa14.73□□□□□ -0.05
BRCC3-202ENST00000340647 ZNF726A6NNF4 738 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 B9A039 149 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 NME4O00746 187 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 FFAR1O14842 300 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 SLC22A2O15244 555 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 PIP5K1CO60331 668 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 OR5F1O95221 314 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 CSNK1A1P48729 337 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 SELENOWP63302 87 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 MAPRE2Q15555 327 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 TMEM249Q2WGJ8 235 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 DEF8Q6ZN54 512 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 VTCN1Q7Z7D3 282 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 CCDC36Q8IYA8 594 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 OR2T12Q8NG77 320 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 OR6N1Q8NGY5 312 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 MOSPD2Q8NHP6 518 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 PROX1Q92786 737 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 NMD3Q96D46 503 aaKnown RBP14.72□□□□□ -0.05
BRCC3-202ENST00000340647 SLC25A44Q96H78 314 aaPredicted RBP14.72□□□□□ -0.05
BRCC3-202ENST00000340647 TNFRSF13CQ96RJ3 184 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 BAG5Q9UL15 447 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 PMF1-BGLAPU3KQ54 211 aa14.72□□□□□ -0.05
BRCC3-202ENST00000340647 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.72□□□□□ -0.056e-8■■■■■ 27.8
BRCC3-202ENST00000340647 IGKV1D-43A0A0B4J1Z2 117 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 ELOVL7A1L3X0 281 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 J3KTA2 159 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 RNF13O43567 381 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 OR7A10O76100 309 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 PRSS23O95084 383 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 IGF2P01344 180 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 F13BP05160 661 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 COX4I1P13073 169 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 NR4A1P22736 598 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 AQP2P41181 271 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 RBM34P42696 430 aaKnown RBP14.71□□□□□ -0.05
BRCC3-202ENST00000340647 GIPRP48546 466 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 ZNF133P52736 654 aaPredicted RBP14.71□□□□□ -0.05
BRCC3-202ENST00000340647 DSCR9P59020 149 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 TAS2R41P59536 307 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 GSG1Q2KHT4 349 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 LRRC23Q53EV4 343 aaPredicted RBP14.71□□□□□ -0.05
BRCC3-202ENST00000340647 ARMC4Q5T2S8 1044 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 CLEC2AQ6UVW9 174 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 CDK20Q8IZL9 346 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 PCYOX1LQ8NBM8 494 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 RP9Q8TA86 221 aaKnown RBP14.71□□□□□ -0.05
BRCC3-202ENST00000340647 TMEM239Q8WW34 195 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 ASB10Q8WXI3 467 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 FAM168AQ92567 244 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 ZNF347Q96SE7 839 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 REPIN1Q9BWE0 567 aaKnown RBP14.71□□□□□ -0.05
BRCC3-202ENST00000340647 MRGBPQ9NV56 204 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 TMEM38BQ9NVV0 291 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 GID8Q9NWU2 228 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 POFUT2Q9Y2G5 429 aa14.71□□□□□ -0.05
BRCC3-202ENST00000340647 MXRA5Q9NR99 2828 aa14.7□□□□□ -0.06
BRCC3-202ENST00000340647 BLOC1S5-TXNDC5H3BN57 136 aa14.7□□□□□ -0.06
BRCC3-202ENST00000340647 CD79AP11912 226 aa14.7□□□□□ -0.06
BRCC3-202ENST00000340647 CAPZA2P47755 286 aa14.7□□□□□ -0.06
BRCC3-202ENST00000340647 RAB1AP62820 205 aa14.7□□□□□ -0.06
BRCC3-202ENST00000340647 VLDLRP98155 873 aa14.7□□□□□ -0.06
BRCC3-202ENST00000340647 RAB39AQ14964 217 aa14.7□□□□□ -0.06
BRCC3-202ENST00000340647 LAPTM4AQ15012 233 aa14.7□□□□□ -0.06
BRCC3-202ENST00000340647 FXNQ16595 210 aa14.7□□□□□ -0.06
BRCC3-202ENST00000340647 KRT80Q6KB66 452 aa14.7□□□□□ -0.06
BRCC3-202ENST00000340647 MEX3DQ86XN8 651 aaKnown RBP14.7□□□□□ -0.06
BRCC3-202ENST00000340647 SVOPLQ8N434 492 aa14.7□□□□□ -0.06
BRCC3-202ENST00000340647 SLC22A24Q8N4F4 322 aa14.7□□□□□ -0.06
BRCC3-202ENST00000340647 PAQR4Q8N4S7 273 aaPredicted RBP14.7□□□□□ -0.06
BRCC3-202ENST00000340647 LRRC75AQ8NAA5 344 aa14.7□□□□□ -0.06
BRCC3-202ENST00000340647 MCHR2Q969V1 340 aa14.7□□□□□ -0.06
BRCC3-202ENST00000340647 ZNF566Q969W8 418 aa14.7□□□□□ -0.06
BRCC3-202ENST00000340647 SH3GL3Q99963 347 aa14.7□□□□□ -0.06
BRCC3-202ENST00000340647 KCNS3Q9BQ31 491 aa14.7□□□□□ -0.06
BRCC3-202ENST00000340647 POLR2J2Q9GZM3 115 aaKnown RBP14.7□□□□□ -0.06
BRCC3-202ENST00000340647 POLR2J3Q9H1A7 115 aaKnown RBP14.7□□□□□ -0.06
BRCC3-202ENST00000340647 MYLK2Q9H1R3 596 aa14.7□□□□□ -0.06
BRCC3-202ENST00000340647 MOV10Q9HCE1 1003 aaKnown RBP14.7□□□□□ -0.06
BRCC3-202ENST00000340647 MED4Q9NPJ6 270 aa14.7□□□□□ -0.06
BRCC3-202ENST00000340647 B3GAT2Q9NPZ5 323 aa14.7□□□□□ -0.06
BRCC3-202ENST00000340647 hCG_2039718K7EN88 272 aa14.69□□□□□ -0.06
BRCC3-202ENST00000340647 DHHO43323 396 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms