RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 ENKURQ8TC29 256 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 FANK1Q8TC84 345 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 TAAR8Q969N4 342 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 SCMH1Q96GD3 660 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 MOGAT1Q96PD6 335 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 FYTTD1Q96QD9 318 aaKnown RBP11.49□□□□□ -0.57
DDX39A-202ENST00000324340 TM9SF2Q99805 663 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 MED18Q9BUE0 208 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 TSSK6Q9BXA6 273 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 POTEKPQ9BYX7 375 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 OR51E2Q9H255 320 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 RANBP3Q9H6Z4 567 aaPredicted RBP11.49□□□□□ -0.57
DDX39A-202ENST00000324340 FKRPQ9H9S5 495 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 MCCC2Q9HCC0 563 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 ZFP64Q9NPA5 681 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 C14orf119Q9NWQ9 140 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 ERVK13-1Q9NX77 482 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 ZNF226Q9NYT6 803 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 BOKQ9UMX3 212 aaPredicted RBP11.49□□□□□ -0.57
DDX39A-202ENST00000324340 HIF3AQ9Y2N7 669 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 KLF13Q9Y2Y9 288 aaPredicted RBP11.49□□□□□ -0.57
DDX39A-202ENST00000324340 TRAV27A0A087WT01 109 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 LOC100506127A0A0U1RQW1 187 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 PINLYPA6NC86 204 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 FAM25EA8MYX2 175 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 FTCDNL1E5RQL4 147 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 LRRN3E7EW58 273 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 ZNF670-ZNF695F2Z2N8 137 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 BHLHE40O14503 412 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 OR2T1O43869 369 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 ORC5O43913 435 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 SP1P08047 785 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 ADRB1P08588 477 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 TGFBR1P36897 503 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 RRAS2P62070 204 aaPredicted RBP11.48□□□□□ -0.57
DDX39A-202ENST00000324340 SNRPGP62308 76 aaKnown RBP11.48□□□□□ -0.57
DDX39A-202ENST00000324340 S100A12P80511 92 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 ZNF79Q15937 498 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.48□□□□□ -0.577e-7■□□□□ 8.4
DDX39A-202ENST00000324340 KLHL12Q53G59 568 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 SLC25A30Q5SVS4 291 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 FAM69AQ5T7M9 428 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 MEDAGQ5VYS4 303 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 SLC25A25Q6KCM7 469 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 ACSM5Q6NUN0 579 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 C3orf33Q6P1S2 294 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 POMZP3Q6PJE2 187 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 CDH24Q86UP0 819 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 ATCAYQ86WG3 371 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 SULF2Q8IWU5 870 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 SPACA3Q8IXA5 215 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 LRRC17Q8N6Y2 441 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 OR2T33Q8NG76 320 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 OR4M1Q8NGD0 313 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 OR4Q3Q8NH05 313 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 OR51A7Q8NH64 312 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 SLC25A43Q8WUT9 341 aaPredicted RBP11.48□□□□□ -0.57
DDX39A-202ENST00000324340 DDIT4LQ96D03 193 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 SAMD8Q96LT4 415 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 JSRP1Q96MG2 331 aaPredicted RBP11.48□□□□□ -0.57
DDX39A-202ENST00000324340 Q96MT0 163 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 TNFRSF13CQ96RJ3 184 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 GPX7Q96SL4 187 aaPredicted RBP11.48□□□□□ -0.57
DDX39A-202ENST00000324340 SMAD5Q99717 465 aaKnown RBP11.48□□□□□ -0.57
DDX39A-202ENST00000324340 CHCHD6Q9BRQ6 235 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 CENPOQ9BU64 300 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 POLDIP3Q9BY77 421 aaKnown RBP11.48□□□□□ -0.57
DDX39A-202ENST00000324340 ENKD1Q9H0I2 346 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 CCDC86Q9H6F5 360 aaKnown RBP11.48□□□□□ -0.57
DDX39A-202ENST00000324340 NANSQ9NR45 359 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 SERINC1Q9NRX5 453 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 RBFOX1Q9NWB1 397 aaKnown RBP11.48□□□□□ -0.57
DDX39A-202ENST00000324340 BAIAP2Q9UQB8 552 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 CACNA1AO00555 2505 aa11.48□□□□□ -0.57
DDX39A-202ENST00000324340 SHISA8B8ZZ34 492 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 MYL12BO14950 172 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 NDUFB2O95178 105 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 IFNA7P01567 189 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 SCG5P05408 212 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 TPOP07202 933 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 GAAP10253 952 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 CD46P15529 392 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 BMP7P18075 431 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 MYL12AP19105 171 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 HK1P19367 917 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 IL11P20809 199 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 GRK5P34947 590 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 MAP2K3P46734 347 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 TNFSF10P50591 281 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 PER3P56645 1201 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 CLDN20P56880 219 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 PRPS1P60891 318 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 GPR85P60893 370 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 ARG2P78540 354 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 CD83Q01151 205 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 SMN1Q16637 294 aaKnown RBP11.47□□□□□ -0.57
DDX39A-202ENST00000324340 HYAL4Q2M3T9 481 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 PGGHGQ32M88 737 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 C1QL3Q5VWW1 255 aa11.47□□□□□ -0.57
DDX39A-202ENST00000324340 LAMTOR1Q6IAA8 161 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms