RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 OR8S1Q8NH09 359 aa15.9■□□□□ 0.14
SCARF1-205ENST00000571272 BAHD1Q8TBE0 780 aaPredicted RBP15.9■□□□□ 0.14
SCARF1-205ENST00000571272 DVL3Q92997 716 aaPredicted RBP15.9■□□□□ 0.14
SCARF1-205ENST00000571272 PNPLA2Q96AD5 504 aa15.9■□□□□ 0.14
SCARF1-205ENST00000571272 RBM18Q96H35 190 aaKnown RBP15.9■□□□□ 0.14
SCARF1-205ENST00000571272 MOGAT1Q96PD6 335 aa15.9■□□□□ 0.14
SCARF1-205ENST00000571272 UTP23Q9BRU9 249 aaKnown RBP15.9■□□□□ 0.14
SCARF1-205ENST00000571272 HRASLS2Q9NWW9 162 aa15.9■□□□□ 0.14
SCARF1-205ENST00000571272 C2orf16Q68DN1 1984 aa15.9■□□□□ 0.14
SCARF1-205ENST00000571272 PPM1BO75688 479 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 GPANK1O95872 356 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 CCR4P51679 360 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 MAZP56270 477 aaKnown RBP15.89■□□□□ 0.13
SCARF1-205ENST00000571272 CTXN1P60606 82 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 RBMS2Q15434 407 aaKnown RBP15.89■□□□□ 0.13
SCARF1-205ENST00000571272 SLC6A19Q695T7 634 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 SLC36A1Q7Z2H8 476 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 ZNF676Q8N7Q3 588 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 LSM14AQ8ND56 463 aaKnown RBP15.89■□□□□ 0.13
SCARF1-205ENST00000571272 CCDC74AQ96AQ1 378 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 PFDN2Q9UHV9 154 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 OR10H1Q9Y4A9 318 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 TGFBR3LH3BV60 316 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 TSPAN9O75954 239 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 EGFP01133 1207 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 GABRA1P14867 456 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 IL10RAQ13651 578 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 C11orf88Q6PI97 169 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 OR51S1Q8NGJ8 323 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 SCARB1Q8WTV0 552 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 TNFAIP8L1Q8WVP5 186 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 NSMAFQ92636 917 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 WDR92Q96MX6 357 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 VSTM2LQ96N03 204 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 LMF2Q9BU23 707 aaKnown RBP15.89■□□□□ 0.13
SCARF1-205ENST00000571272 CHST6Q9GZX3 395 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 ETV7Q9Y603 341 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 IGKV1D-42A0A075B6H8 117 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 SLC22A23A1A5C7 686 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 OR6C65A6NJZ3 312 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 H7C417 338 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 BET1O15155 118 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 KDM4BO94953 1096 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 GDI1P31150 447 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 GRK6P43250 576 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 VEGFBP49765 207 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 PRPS1P60891 318 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 BAMBIQ13145 260 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 SLC16A9Q7RTY1 509 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 OR6N2Q8NGY6 317 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 SHARPINQ9H0F6 387 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 MTFP1Q9UDX5 166 aa15.89■□□□□ 0.13
SCARF1-205ENST00000571272 SZT2Q5T011 3432 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 ATP6V1G2-DDX39BF2Z307 99 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 XRCC3O43542 346 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 RAD1O60671 282 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 LDOC1O95751 146 aaPredicted RBP15.88■□□□□ 0.13
SCARF1-205ENST00000571272 GTF2F2P13984 249 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 CTRB1P17538 263 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 MAPK3P27361 379 aaPredicted RBP15.88■□□□□ 0.13
SCARF1-205ENST00000571272 NFATC4Q14934 902 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 ZNF141Q15928 474 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 CTRB2Q6GPI1 263 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 GSG1LQ6UXU4 331 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 DPY19L4Q7Z388 723 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 OR2AK2Q8NG84 335 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 LMF1Q96S06 567 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 GAL3ST1Q99999 423 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 MRI1Q9BV20 369 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 CERS4Q9HA82 394 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 ZC4H2Q9NQZ6 224 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 LAMP5Q9UJQ1 280 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 FBXL2Q9UKC9 423 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 FANCMQ8IYD8 2048 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 TRAV18A0A075B6X5 111 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 A6NCN8 305 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 SERINC4A6NH21 518 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 ELOA3DA6NLF2 546 aaPredicted RBP15.88■□□□□ 0.13
SCARF1-205ENST00000571272 F5H5P2 479 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 B3GALNT1O75752 331 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 SPDEFO95238 335 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 PPP3CBP16298 524 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 NAGAP17050 411 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 FAUP35544 74 aaKnown RBP15.88■□□□□ 0.13
SCARF1-205ENST00000571272 MECP2P51608 486 aaKnown RBP15.88■□□□□ 0.13
SCARF1-205ENST00000571272 RAB38P57729 211 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 RPS4XP62701 263 aaKnown RBP15.88■□□□□ 0.13
SCARF1-205ENST00000571272 ELOA3BQ3SY89 546 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 TMEM196Q5HYL7 178 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 ELOA3Q8NG57 546 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 HOXB13Q92826 284 aaPredicted RBP15.88■□□□□ 0.13
SCARF1-205ENST00000571272 BMFQ96LC9 184 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 RPP25Q9BUL9 199 aaKnown RBP15.88■□□□□ 0.13
SCARF1-205ENST00000571272 WDR76Q9H967 626 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 Q9N2J8 555 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 FAM60AQ9NP50 221 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 PCOLCE2Q9UKZ9 415 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 MOKQ9UQ07 419 aa15.88■□□□□ 0.13
SCARF1-205ENST00000571272 A0A1B0GTQ1 180 aa15.87■□□□□ 0.13
SCARF1-205ENST00000571272 NPIPB9F8W1W9 429 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms