RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 SLC35F2Q8IXU6 374 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 GALNT16Q8N428 558 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 EXD3Q8N9H8 876 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 ZNF485Q8NCK3 441 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 OR6K6Q8NGW6 343 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 ZHX1-C8orf76Q96EF9 292 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 DNAJA3Q96EY1 480 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 AGAP4Q96P64 663 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 NAA11Q9BSU3 229 aaPredicted RBP12.39□□□□□ -0.43
TPM1-215ENST00000558868 ALG12Q9BV10 488 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 ZFP64Q9NPA5 681 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 BABAM2Q9NXR7 383 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 VSX1Q9NZR4 365 aaPredicted RBP12.39□□□□□ -0.43
TPM1-215ENST00000558868 B4GALT7Q9UBV7 327 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 CDV3Q9UKY7 258 aaKnown RBP12.39□□□□□ -0.43
TPM1-215ENST00000558868 STUB1Q9UNE7 303 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 SSR3Q9UNL2 185 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 RPH3AQ9Y2J0 694 aaPredicted RBP12.39□□□□□ -0.43
TPM1-215ENST00000558868 PCSK5Q92824 1860 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 NAV2Q8IVL1 2488 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 OR2M5A3KFT3 312 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 CENPBD1B2RD01 187 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 ZNF670-ZNF695F2Z2N8 137 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 SULT2B1O00204 365 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 PLGP00747 810 aaPredicted RBP12.38□□□□□ -0.43
TPM1-215ENST00000558868 MRPL3P09001 348 aaKnown RBP12.38□□□□□ -0.43
TPM1-215ENST00000558868 TCEA1P23193 301 aaKnown RBP12.38□□□□□ -0.43
TPM1-215ENST00000558868 CRABP1P29762 137 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 VBP1P61758 197 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 LSM3P62310 102 aaKnown RBP12.38□□□□□ -0.43
TPM1-215ENST00000558868 HSF1Q00613 529 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 TOMM20Q15388 145 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 TGIF1Q15583 401 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 OR1C1Q15619 314 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 CRTC2Q53ET0 693 aaPredicted RBP12.38□□□□□ -0.43
TPM1-215ENST00000558868 EEF1A1P5Q5VTE0 462 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 B3GLCTQ6Y288 498 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 SLC16A9Q7RTY1 509 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 ZNF227Q86WZ6 799 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 UEVLDQ8IX04 471 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 SYS1Q8N2H4 156 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 OR5M1Q8NGP8 315 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 OR14L1PQ8NHC6 308 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 ZFAND2BQ8WV99 257 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 SPRYD4Q8WW59 207 aaPredicted RBP12.38□□□□□ -0.43
TPM1-215ENST00000558868 MIB2Q96AX9 1013 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 COQ7Q99807 217 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 ZNF649Q9BS31 505 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 OR2B2Q9GZK3 357 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 RNF32Q9H0A6 362 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 SRA1Q9HD15 236 aaKnown RBP12.38□□□□□ -0.43
TPM1-215ENST00000558868 TRIM36Q9NQ86 728 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 RASD1Q9Y272 281 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 PTPRBP23467 1997 aa12.38□□□□□ -0.43
TPM1-215ENST00000558868 LOC100506127A0A0U1RQW1 187 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 LOC102725191A0A1B0GVB3 256 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 ARGFXA6NJG6 315 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 DNPH1O43598 174 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 AKR7A3O95154 331 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 VAMP5O95183 116 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 ZNF182P17025 639 aaPredicted RBP12.37□□□□□ -0.43
TPM1-215ENST00000558868 CD53P19397 219 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 GABRA5P31644 462 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 SFTPDP35247 375 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 NCS1P62166 190 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 RSPO4Q2I0M5 234 aaPredicted RBP12.37□□□□□ -0.43
TPM1-215ENST00000558868 LINC01590Q5TEZ4 76 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 LIPKQ5VXJ0 399 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 TMEM225Q6GV28 225 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 SLC35D2Q76EJ3 337 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 KCTD20Q7Z5Y7 419 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 ZBTB46Q86UZ6 589 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 GHDCQ8N2G8 530 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 OR51L1Q8NGJ5 315 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 ZPLD1Q8TCW7 415 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 HAVCR2Q8TDQ0 301 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 ASB10Q8WXI3 467 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 RPL3LQ92901 407 aaKnown RBP12.37□□□□□ -0.43
TPM1-215ENST00000558868 OXGR1Q96P68 337 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 TBX5Q99593 518 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 CHCHD6Q9BRQ6 235 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 OR51E2Q9H255 320 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 DCSTAMPQ9H295 470 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 SYT4Q9H2B2 425 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 TMEM185BQ9H7F4 350 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 SIAEQ9HAT2 523 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 KLF13Q9Y2Y9 288 aaPredicted RBP12.37□□□□□ -0.43
TPM1-215ENST00000558868 TMEM14AQ9Y6G1 99 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 CPAMD8Q8IZJ3 1885 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 FRYQ5TBA9 3013 aa12.37□□□□□ -0.43
TPM1-215ENST00000558868 A0A1W2PNR3 127 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 A0A1W2PQL4 384 aaPredicted RBP12.36□□□□□ -0.43
TPM1-215ENST00000558868 SLC22A23A1A5C7 686 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 OR5H15A6NDH6 313 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 LRRC3CA6NJW4 275 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 AQP7P3A6NL99 342 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 ZNF891A8MT65 544 aaPredicted RBP12.36□□□□□ -0.43
TPM1-215ENST00000558868 PHYHO14832 338 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 NEURL1O76050 574 aa12.36□□□□□ -0.43
TPM1-215ENST00000558868 WDPCPO95876 746 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms