RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 CHID1Q9BWS9 393 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 REEP1Q9H902 201 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 OBP2BQ9NPH6 170 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 RASSF1Q9NS23 344 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 HECTD1Q9ULT8 2610 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 TRAV27A0A087WT01 109 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 TCRBV3S1A0A5B6 114 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 M0R3G1 203 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 OR10H3O60404 316 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 CIB2O75838 187 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 IGHG1P01857 330 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 LIMS1P48059 325 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 CSNK1A1P48729 337 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 NR1H2P55055 460 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 CAMK2DQ13557 499 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 LAPTM4AQ15012 233 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 PPA1Q15181 289 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 SEC23BQ15437 767 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 TAB1Q15750 504 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 GABRA6Q16445 453 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 BEX5Q5H9J7 111 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 C9orf135Q5VTT2 229 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 FAM205BPQ63HN1 556 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 ASRGL1Q7L266 308 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 WFDC8Q8IUA0 241 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 OR13C2Q8NGS9 318 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 MOSPD2Q8NHP6 518 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 CANT1Q8WVQ1 401 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 RSRC1Q96IZ7 334 aaKnown RBP13.19□□□□□ -0.3
RNF4-210ENST00000508235 POLDIP3Q9BY77 421 aaKnown RBP13.19□□□□□ -0.3
RNF4-210ENST00000508235 ULBP2Q9BZM5 246 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 CLEC4MQ9H2X3 399 aaPredicted RBP13.19□□□□□ -0.3
RNF4-210ENST00000508235 TXNIPQ9H3M7 391 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 CRLF2Q9HC73 371 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 GPR35Q9HC97 309 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 AMDHD2Q9Y303 409 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 MAGED1Q9Y5V3 778 aaPredicted RBP13.19□□□□□ -0.3
RNF4-210ENST00000508235 LYVE1Q9Y5Y7 322 aa13.19□□□□□ -0.3
RNF4-210ENST00000508235 CACNA1DQ01668 2161 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 UNC119BA6NIH7 251 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 ZNF99A8MXY4 864 aaPredicted RBP13.18□□□□□ -0.3
RNF4-210ENST00000508235 CDC42EP2O14613 210 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 ENTPD5O75356 428 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 WNT11O96014 354 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 CST1P01037 141 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 IGHMP01871 453 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 THBDP07204 575 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 HOXB1P14653 301 aaPredicted RBP13.18□□□□□ -0.3
RNF4-210ENST00000508235 CDH2P19022 906 aaPredicted RBP13.18□□□□□ -0.3
RNF4-210ENST00000508235 FPR3P25089 353 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 RPL4P36578 427 aaKnown RBP13.18□□□□□ -0.3
RNF4-210ENST00000508235 CLRN1P58418 232 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 CTXN1P60606 82 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 RPL27P61353 136 aaKnown RBP13.18□□□□□ -0.3
RNF4-210ENST00000508235 LGALS3BPQ08380 585 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 MELKQ14680 651 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 ACKR1Q16570 336 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 C1orf146Q5VVC0 180 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 ANKRD16Q6P6B7 361 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 MEX3DQ86XN8 651 aaKnown RBP13.18□□□□□ -0.3
RNF4-210ENST00000508235 OR1K1Q8NGR3 316 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 FNDC8Q8TC99 324 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 GNPDA2Q8TDQ7 276 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 TMEM54Q969K7 222 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 TNFRSF13CQ96RJ3 184 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 MOV10Q9HCE1 1003 aaKnown RBP13.18□□□□□ -0.3
RNF4-210ENST00000508235 GLTPQ9NZD2 209 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 EDARQ9UNE0 448 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 SIGLEC7Q9Y286 467 aa13.18□□□□□ -0.3
RNF4-210ENST00000508235 SAMHD1Q9Y3Z3 626 aaKnown RBP13.18□□□□□ -0.3
RNF4-210ENST00000508235 UTP20O75691 2785 aaKnown RBP13.17□□□□□ -0.3
RNF4-210ENST00000508235 A6NIZ1 184 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 DEFB108AA8MXU0 73 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 GNGT2O14610 69 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 KLF4O43474 513 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 CCNB2O95067 398 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 NDUFB2O95178 105 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 HRGP04196 525 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 PGA4P0DJD7 388 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 PGA3P0DJD8 388 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 ACADSP16219 412 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 FOXG1P55316 489 aaPredicted RBP13.17□□□□□ -0.3
RNF4-210ENST00000508235 RAP1BP61224 184 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 RAP1AP62834 184 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 CEACAM16Q2WEN9 425 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 ALKBH2Q6NS38 261 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 C1orf94Q6P1W5 598 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 KLHL17Q6TDP4 642 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 C22orf34Q6ZV56 151 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 LINGO2Q7L985 606 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 CCDC36Q8IYA8 594 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 LRRC75AQ8NAA5 344 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 OR4C15Q8NGM1 316 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 OR52N5Q8NH56 324 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 MAGEE2Q8TD90 523 aaPredicted RBP13.17□□□□□ -0.3
RNF4-210ENST00000508235 ASB10Q8WXI3 467 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 PIK3IP1Q96FE7 263 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 ESRP2Q9H6T0 727 aaKnown RBP13.17□□□□□ -0.3
RNF4-210ENST00000508235 SLC17A5Q9NRA2 495 aa13.17□□□□□ -0.3
RNF4-210ENST00000508235 CCM2LQ9NUG4 571 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms