RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 hCG_2039718K7EN88 272 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 GYG2O15488 501 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 SIAH2O43255 324 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 KLF4O43474 513 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 PIP5K1CO60331 668 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 ENTPD5O75356 428 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 WNT11O96014 354 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 IGHMP01871 453 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 SAGP10523 405 aaPredicted RBP10.42□□□□□ -0.74
VPS52-213ENST00000461743 LOXP28300 417 aaPredicted RBP10.42□□□□□ -0.74
VPS52-213ENST00000461743 YAP1P46937 504 aaKnown RBP10.42□□□□□ -0.74
VPS52-213ENST00000461743 KRTAP10-9P60411 292 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 PRPS1P60891 318 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 GK3PQ14409 553 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 TSC22D1Q15714 1073 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 IQCCQ4KMZ1 466 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 FGD3Q5JSP0 725 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 FAM205BPQ63HN1 556 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 ANKRD34AQ69YU3 496 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 KLHL17Q6TDP4 642 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 PAMR1Q6UXH9 720 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 TMPRSS11FQ6ZWK6 438 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 SLC35D2Q76EJ3 337 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 WFDC8Q8IUA0 241 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 C20orf196Q8IYI0 205 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 SLC7A13Q8TCU3 470 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 PIK3IP1Q96FE7 263 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 BTBD10Q9BSF8 475 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 TMEM204Q9BSN7 226 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 SLC17A5Q9NRA2 495 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 RHCGQ9UBD6 479 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 V9GYQ6 96 aa10.42□□□□□ -0.74
VPS52-213ENST00000461743 PRRC2AP48634 2157 aaKnown RBP10.42□□□□□ -0.74
VPS52-213ENST00000461743 ARPC4-TTLL3A0A0A6YYG9 625 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 TCRBV5S2A0A599 114 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 SLC35F4A4IF30 521 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 A6NHS1 94 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 ZNF99A8MXY4 864 aaPredicted RBP10.41□□□□□ -0.74
VPS52-213ENST00000461743 EFCAB9A8MZ26 197 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 MCIDASD6RGH6 385 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 C11orf98E9PRG8 122 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 BLOC1S5-TXNDC5H3BN57 136 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 CLOCKO15516 846 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 UPK3AO75631 287 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 KRT36O76013 467 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 PDE5AO76074 875 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 IGHG1P01857 330 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 HLA-DOBP13765 273 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 IFNGR1P15260 489 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 MSX2P35548 267 aaPredicted RBP10.41□□□□□ -0.74
VPS52-213ENST00000461743 CSNK1A1P48729 337 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 SPIBQ01892 262 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 ROR2Q01974 943 aaKnown RBP10.41□□□□□ -0.74
VPS52-213ENST00000461743 BNIP1Q12981 228 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 C3orf36Q3SXR2 165 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 ALG10Q5BKT4 473 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 NCMAPQ5T1S8 102 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 ANKRD16Q6P6B7 361 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 CYP2R1Q6VVX0 501 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 C20orf204Q6ZNR8 217 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 C22orf34Q6ZV56 151 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 ZNF627Q7L945 461 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 ZDHHC21Q8IVQ6 265 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 CCDC36Q8IYA8 594 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 LINC00471Q8N535 108 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 LRRC17Q8N6Y2 441 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 OR1K1Q8NGR3 316 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 ZNF566Q969W8 418 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 CCDC124Q96CT7 223 aaKnown RBP10.41□□□□□ -0.74
VPS52-213ENST00000461743 SLC7A6OSQ96CW6 309 aaPredicted RBP10.41□□□□□ -0.74
VPS52-213ENST00000461743 PLPPR2Q96GM1 343 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 SLC25A44Q96H78 314 aaPredicted RBP10.41□□□□□ -0.74
VPS52-213ENST00000461743 RADILQ96JH8 1075 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 LRGUKQ96M69 825 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 RAB3IPQ96QF0 476 aaPredicted RBP10.41□□□□□ -0.74
VPS52-213ENST00000461743 SEPHS2Q99611 448 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 FUZQ9BT04 418 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 THTPAQ9BU02 230 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 PLEKHF2Q9H8W4 249 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 GPR35Q9HC97 309 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 INIPQ9NRY2 104 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 MED29Q9NX70 200 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 MGAT4BQ9UQ53 548 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 RNF115Q9Y4L5 304 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 SLC25A15Q9Y619 301 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 CELSR1Q9NYQ6 3014 aa10.41□□□□□ -0.74
VPS52-213ENST00000461743 ARID1AO14497 2285 aa10.4□□□□□ -0.74
VPS52-213ENST00000461743 AQP12BA6NM10 295 aa10.4□□□□□ -0.74
VPS52-213ENST00000461743 TMCC2O75069 709 aa10.4□□□□□ -0.74
VPS52-213ENST00000461743 GADD45GO95257 159 aa10.4□□□□□ -0.74
VPS52-213ENST00000461743 BCL10O95999 233 aa10.4□□□□□ -0.74
VPS52-213ENST00000461743 CD3EP07766 207 aa10.4□□□□□ -0.74
VPS52-213ENST00000461743 PGA4P0DJD7 388 aa10.4□□□□□ -0.74
VPS52-213ENST00000461743 PGA3P0DJD8 388 aa10.4□□□□□ -0.74
VPS52-213ENST00000461743 MAKP20794 623 aa10.4□□□□□ -0.74
VPS52-213ENST00000461743 PTAFRP25105 342 aa10.4□□□□□ -0.74
VPS52-213ENST00000461743 IFNGR2P38484 337 aa10.4□□□□□ -0.74
VPS52-213ENST00000461743 LIMS1P48059 325 aa10.4□□□□□ -0.74
VPS52-213ENST00000461743 BIDP55957 195 aa10.4□□□□□ -0.74
VPS52-213ENST00000461743 CEACAM16Q2WEN9 425 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms