RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 MYEF2Q9P2K5 600 aaKnown RBP3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 SPASTQ9UBP0 616 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 CYB5R1Q9UHQ9 305 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 SCP2D1Q9UJQ7 156 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 MGAT4AQ9UM21 535 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 SSR3Q9UNL2 185 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 R4GN57 208 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 TRPM7Q96QT4 1865 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF106Q9H2Y7 1883 aaKnown RBP3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 PLXNA1Q9UIW2 1896 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 TRAV6A0A075B6T7 132 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 MFSD2BA6NFX1 497 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 ANKDD1BA6NHY2 528 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 KRTAP29-1A8MX34 341 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF670-ZNF695F2Z2N8 137 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 INMT-MINDY4F8WBC2 141 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 AIPO00170 330 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 DFFAO00273 331 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 CDC7O00311 574 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 CXCR6O00574 342 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 EDIL3O43854 480 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 FMO6PO60774 539 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 STX11O75558 287 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 KRT33AO76009 404 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 CCNB2O95067 398 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 CALCAP01258 141 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 PIGRP01833 764 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 FABP3P05413 133 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 ANKRD34CP0C6C1 535 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 PIPP12273 146 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 NCK1P16333 377 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 CCND3P30281 292 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 SFTPDP35247 375 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 MMP12P39900 470 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 IER3P46695 156 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 BRCC3P46736 316 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 NPBWR1P48145 328 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 SNU13P55769 128 aaKnown RBP3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 C1QTNF8P60827 252 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 LCP2Q13094 533 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 DMC1Q14565 340 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 OPCMLQ14982 345 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 LTB4RQ15722 352 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF674Q2M3X9 581 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 FUT11Q495W5 492 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 CDNFQ49AH0 187 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 VPS26BQ4G0F5 336 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 KLHL22Q53GT1 634 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 SPIN4Q56A73 249 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 FAM46CQ5VWP2 391 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 MEDAGQ5VYS4 303 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 SAXO2Q658L1 398 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF57Q68EA5 555 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 TCEAL6Q6IPX3 200 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 FUT10Q6P4F1 479 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 HAGHLQ6PII5 290 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 BAIAP2L2Q6UXY1 529 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 TMEM179Q6ZVK1 233 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 MOB2Q70IA6 237 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 CHMP1BQ7LBR1 199 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 SNX20Q7Z614 316 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZFAND4Q86XD8 727 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 MEX3DQ86XN8 651 aaKnown RBP3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 SIAH3Q8IW03 269 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 LAX1Q8IWV1 398 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 SVBPQ8N300 66 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 Q8N402 240 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 STPG2Q8N412 459 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 C12orf45Q8N5I9 185 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 EIF4E3Q8N5X7 224 aaKnown RBP3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 PQLC3Q8N755 202 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 AMER3Q8N944 861 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 DENND6BQ8NEG7 585 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 DUSP18Q8NEJ0 188 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 DBF4BQ8NFT6 615 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR2T11Q8NH01 316 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 JOSD2Q8TAC2 188 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 FBXO30Q8TB52 745 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 ASB13Q8WXK3 278 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 NARS2Q96I59 477 aaKnown RBP3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 PGLYRP2Q96PD5 576 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 KCNS3Q9BQ31 491 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 C7orf50Q9BRJ6 194 aaKnown RBP3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 SEC22CQ9BRL7 303 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 GINS4Q9BRT9 223 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 MARVELD1Q9BSK0 173 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 NFKBIZQ9BYH8 718 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 ACTR6Q9GZN1 396 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF350Q9GZX5 532 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 RIMS4Q9H426 269 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 POPDC3Q9HBV1 291 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 MID1IP1Q9NPA3 183 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 PHPT1Q9NRX4 125 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 ABCC13Q9NSE7 274 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 BABAM2Q9NXR7 383 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 STOX2Q9P2F5 926 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 EXTL2Q9UBQ6 330 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 PURGQ9UJV8 347 aaKnown RBP3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 DUSP12Q9UNI6 340 aa3.88□□□□□ -1.79
HMGB1P16-201ENST00000447155 POFUT2Q9Y2G5 429 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms