RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 NPIPB4C9JG80 1138 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 ZNF587BE7ETH6 402 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 PDLIM1O00151 329 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 HNRNPRO43390 633 aaKnown RBP16.92■□□□□ 0.3
HOXA9-202ENST00000396345 E2F6O75461 281 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 NDUFB2O95178 105 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 GASTP01350 101 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 COX5AP20674 150 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 RPL4P36578 427 aaKnown RBP16.92■□□□□ 0.3
HOXA9-202ENST00000396345 FOXG1P55316 489 aaPredicted RBP16.92■□□□□ 0.3
HOXA9-202ENST00000396345 TSC22D1Q15714 1073 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 ACKR1Q16570 336 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 ANKRD34AQ69YU3 496 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 BHLHA15Q7RTS1 189 aaPredicted RBP16.92■□□□□ 0.3
HOXA9-202ENST00000396345 HDDC2Q7Z4H3 204 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 TMEM179BQ7Z7N9 219 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 IGFN1Q86VF2 1251 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 C20orf196Q8IYI0 205 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 AQP11Q8NBQ7 271 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 STEAP2Q8NFT2 490 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 OR10G2Q8NGC3 310 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 GIPC3Q8TF64 312 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 ASB10Q8WXI3 467 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 LRR1Q96L50 414 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 ALKBH3Q96Q83 286 aaPredicted RBP16.92■□□□□ 0.3
HOXA9-202ENST00000396345 TXNIPQ9H3M7 391 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 TAS2R16Q9NYV7 291 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 CRIM1Q9NZV1 1036 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 PKDREJQ9NTG1 2253 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 CENPEQ02224 2701 aa16.92■□□□□ 0.3
HOXA9-202ENST00000396345 M0R3G1 203 aa16.91■□□□□ 0.3
HOXA9-202ENST00000396345 ITGA5P08648 1049 aa16.91■□□□□ 0.3
HOXA9-202ENST00000396345 FCGR1AP12314 374 aa16.91■□□□□ 0.3
HOXA9-202ENST00000396345 ZNF26P17031 533 aaPredicted RBP16.91■□□□□ 0.3
HOXA9-202ENST00000396345 FASP25445 335 aa16.91■□□□□ 0.3
HOXA9-202ENST00000396345 MPGP29372 298 aa16.91■□□□□ 0.3
HOXA9-202ENST00000396345 CSNK1A1P48729 337 aa16.91■□□□□ 0.3
HOXA9-202ENST00000396345 RPL27P61353 136 aaKnown RBP16.91■□□□□ 0.3
HOXA9-202ENST00000396345 TOP3AQ13472 1001 aaPredicted RBP16.91■□□□□ 0.3
HOXA9-202ENST00000396345 ATP6AP1Q15904 470 aa16.91■□□□□ 0.3
HOXA9-202ENST00000396345 C9orf135Q5VTT2 229 aa16.91■□□□□ 0.3
HOXA9-202ENST00000396345 LINGO2Q7L985 606 aa16.91■□□□□ 0.3
HOXA9-202ENST00000396345 C10orf67Q8IYJ2 551 aa16.91■□□□□ 0.3
HOXA9-202ENST00000396345 OR6N1Q8NGY5 312 aa16.91■□□□□ 0.3
HOXA9-202ENST00000396345 PYDC1Q8WXC3 89 aa16.91■□□□□ 0.3
HOXA9-202ENST00000396345 ZNF566Q969W8 418 aa16.91■□□□□ 0.3
HOXA9-202ENST00000396345 SLC25A44Q96H78 314 aaPredicted RBP16.91■□□□□ 0.3
HOXA9-202ENST00000396345 WFIKKN1Q96NZ8 548 aa16.91■□□□□ 0.3
HOXA9-202ENST00000396345 MED18Q9BUE0 208 aa16.91■□□□□ 0.3
HOXA9-202ENST00000396345 KATNB1Q9BVA0 655 aa16.91■□□□□ 0.3
HOXA9-202ENST00000396345 ACTR6Q9GZN1 396 aa16.91■□□□□ 0.3
HOXA9-202ENST00000396345 OR10A4Q9H209 315 aa16.91■□□□□ 0.3
HOXA9-202ENST00000396345 DENND2DQ9H6A0 471 aaPredicted RBP16.91■□□□□ 0.3
HOXA9-202ENST00000396345 B3GAT2Q9NPZ5 323 aa16.91■□□□□ 0.3
HOXA9-202ENST00000396345 PDP1Q9P0J1 537 aaPredicted RBP16.91■□□□□ 0.3
HOXA9-202ENST00000396345 MGAT4BQ9UQ53 548 aa16.91■□□□□ 0.3
HOXA9-202ENST00000396345 CIB4A0PJX0 185 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 SH3D21A4FU49 640 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 IGHMP01871 453 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 CD14P08571 375 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 PPP3CBP16298 524 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 ERVK-25P63136 954 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 ROR2Q01974 943 aaKnown RBP16.9■□□□□ 0.3
HOXA9-202ENST00000396345 TGFBR3Q03167 851 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 PHYHD1Q5SRE7 291 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 ARMC4Q5T2S8 1044 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 HMBOX1Q6NT76 420 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 SMARCD3Q6STE5 483 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 FANK1Q8TC84 345 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 FAM222BQ8WU58 562 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 TMEM54Q969K7 222 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 GTPBP3Q969Y2 492 aaKnown RBP16.9■□□□□ 0.3
HOXA9-202ENST00000396345 S100PBPQ96BU1 408 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 DACH2Q96NX9 599 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 TSPAN32Q96QS1 320 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 DGCR6LQ9BY27 220 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 POLDIP3Q9BY77 421 aaKnown RBP16.9■□□□□ 0.3
HOXA9-202ENST00000396345 NTN4Q9HB63 628 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 GPR35Q9HC97 309 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 STX18Q9P2W9 335 aaKnown RBP16.9■□□□□ 0.3
HOXA9-202ENST00000396345 IL20RAQ9UHF4 553 aa16.9■□□□□ 0.3
HOXA9-202ENST00000396345 ZNF346Q9UL40 294 aaKnown RBP16.9■□□□□ 0.3
HOXA9-202ENST00000396345 ARRDC5A6NEK1 342 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 RPL36A-HNRNPH2H7BZ11 118 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 RAD51DO75771 328 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 IGHG1P01857 330 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 EPXP11678 715 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 ACADSP16219 412 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 ACVR1BP36896 505 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 ARHGDIAP52565 204 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 CLRN1P58418 232 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 FXYD6P3P58550 94 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 RUNX1T1Q06455 604 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 RFX4Q33E94 735 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 ZNF787Q6DD87 383 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 ZFP1Q6P2D0 407 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 THSD4Q6ZMP0 1018 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 LRTOMTQ8WZ04 291 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 GPX7Q96SL4 187 aaPredicted RBP16.89■□□□□ 0.29
HOXA9-202ENST00000396345 USB1Q9BQ65 265 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms