RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 ALG12Q9BV10 488 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 ATG5Q9H1Y0 275 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 RXFP3Q9NSD7 469 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 ZMAT5Q9UDW3 170 aaKnown RBP13.39□□□□□ -0.27
COL6A2-202ENST00000310645 NDRG3Q9UGV2 375 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 KLHDC2Q9Y2U9 406 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 F8W036 122 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 H7C1C5 153 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 CMPK1P30085 196 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 PEBP1P30086 187 aaKnown RBP13.39□□□□□ -0.27
COL6A2-202ENST00000310645 MECP2P51608 486 aaKnown RBP13.39□□□□□ -0.27
COL6A2-202ENST00000310645 LCN6P62502 163 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 BLOC1S1P78537 153 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 FHL1Q13642 323 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 AKIRIN2Q53H80 203 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 PRRT3Q5FWE3 981 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 ZNF627Q7L945 461 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 NPEPL1Q8NDH3 523 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 OR2L8Q8NGY9 312 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 PHYHIPQ92561 330 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 FRRS1LQ9P0K9 344 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 TMEM82A0PJX8 343 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 AMY2AP04746 511 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 RHOP08100 348 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 ADH5P11766 374 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 TLX1P31314 330 aaPredicted RBP13.39□□□□□ -0.27
COL6A2-202ENST00000310645 DLSTP36957 453 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 POU3F4P49335 361 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 RAB13P51153 203 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 GAS6Q14393 721 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 ZNF234Q14588 700 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 NNATQ16517 81 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 HNRNPA1L2Q32P51 320 aaKnown RBP13.39□□□□□ -0.27
COL6A2-202ENST00000310645 LY6G6FQ5SQ64 297 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 ARHGAP40Q5TG30 622 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 MOB3CQ70IA8 216 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 CCDC36Q8IYA8 594 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 OR1J2Q8NGS2 313 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 BARX1Q9HBU1 254 aaPredicted RBP13.39□□□□□ -0.27
COL6A2-202ENST00000310645 SERTAD3Q9UJW9 196 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 OR2AT4A6NND4 320 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 FADS1O60427 444 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 SCRN3Q0VDG4 424 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 SNTB1Q13884 538 aaKnown RBP13.38□□□□□ -0.27
COL6A2-202ENST00000310645 NKPD1Q17RQ9 610 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 HFEQ30201 348 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 RAB11FIP2Q7L804 512 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 ANKRD33Q7Z3H0 272 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 VN1R4Q7Z5H5 301 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 THAP6Q8TBB0 222 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 PAQR8Q8TEZ7 354 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 C15orf40Q8WUR7 153 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 SMARCD2Q92925 531 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 LRRC3BQ96PB8 259 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 TINAGL1Q9GZM7 467 aaPredicted RBP13.38□□□□□ -0.27
COL6A2-202ENST00000310645 LMAN2LQ9H0V9 348 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 TAS2R8Q9NYW2 309 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 A0A0D9SG52 128 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 PRSS44E7EML9 344 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 RAB3DO95716 219 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 EPCAMP16422 314 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 MNDAP41218 407 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 PPIAP62937 165 aaKnown RBP13.38□□□□□ -0.27
COL6A2-202ENST00000310645 ALKBH1Q13686 389 aaKnown RBP13.38□□□□□ -0.27
COL6A2-202ENST00000310645 ELAVL3Q14576 367 aaKnown RBP13.38□□□□□ -0.27
COL6A2-202ENST00000310645 CEBPEQ15744 281 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 ZNF77Q15935 545 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 JMJD6Q6NYC1 403 aaPredicted RBP13.38□□□□□ -0.27
COL6A2-202ENST00000310645 TMEM71Q6P5X7 295 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 MFSD9Q8NBP5 474 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 CPNE2Q96FN4 548 aaPredicted RBP13.38□□□□□ -0.27
COL6A2-202ENST00000310645 KLF2Q9Y5W3 355 aaPredicted RBP13.38□□□□□ -0.27
COL6A2-202ENST00000310645 ELOA3DA6NLF2 546 aaPredicted RBP13.38□□□□□ -0.27
COL6A2-202ENST00000310645 MOSPD3O75425 235 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 CTAG2O75638 210 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 CISD3P0C7P0 127 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 AGTR1P30556 359 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 OR7A5Q15622 319 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 ELOA3BQ3SY89 546 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 NKAIN2Q5VXU1 208 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 GLT8D1Q68CQ7 371 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 KIRREL2Q6UWL6 708 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 ADAMTSL4Q6UY14 1074 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 SVBPQ8N300 66 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 ELOA3Q8NG57 546 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 OR4N2Q8NGD1 307 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 TSEN15Q8WW01 171 aaKnown RBP13.38□□□□□ -0.27
COL6A2-202ENST00000310645 MICU1Q9BPX6 476 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 MKKSQ9NPJ1 570 aaPredicted RBP13.38□□□□□ -0.27
COL6A2-202ENST00000310645 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.38□□□□□ -0.27
COL6A2-202ENST00000310645 STEAP1Q9UHE8 339 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 GPN3Q9UHW5 284 aaPredicted RBP13.38□□□□□ -0.27
COL6A2-202ENST00000310645 EDARQ9UNE0 448 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 C19orf53Q9UNZ5 99 aaPredicted RBP13.38□□□□□ -0.27
COL6A2-202ENST00000310645 ETV7Q9Y603 341 aa13.38□□□□□ -0.27
COL6A2-202ENST00000310645 ARPC4-TTLL3A0A0A6YYG9 625 aa13.37□□□□□ -0.27
COL6A2-202ENST00000310645 TMEM218A2RU14 115 aa13.37□□□□□ -0.27
COL6A2-202ENST00000310645 EIF4E2O60573 245 aaKnown RBP13.37□□□□□ -0.27
COL6A2-202ENST00000310645 MAPK3P27361 379 aaPredicted RBP13.37□□□□□ -0.27
COL6A2-202ENST00000310645 RELTQ969Z4 430 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms