RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 MIB2Q96AX9 1013 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 ISOC1Q96CN7 298 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 OR2B2Q9GZK3 357 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 PAIP2BQ9ULR5 123 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 CFAP54Q96N23 3096 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 FAM186AA6NE01 2351 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 A0A1W2PNR3 127 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 NPIPB13A6NJU9 1138 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 NPIPB4C9JG80 1138 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 J3QRE1 110 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 PMS2P2O95744 297 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 RENP00797 406 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 IGHA1P01876 353 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 CD46P15529 392 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 SHC1P29353 583 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 ETV1P50549 477 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 B3GALT5-AS1P59052 145 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 SLC35A1P78382 337 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 ACKR1Q16570 336 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 MESTQ5EB52 335 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 LCN1P1Q5VSP4 162 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 ADCK1Q86TW2 530 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 FAM83FQ8NEG4 500 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 OR51G2Q8NGK0 314 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 C5orf34Q96MH7 638 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 SNX18Q96RF0 628 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 RACGAP1Q9H0H5 632 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 B4GALT7Q9UBV7 327 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 MPDZO75970 2070 aa15.86■□□□□ 0.13
SHKBP1-224ENST00000600718 GVINP1Q7Z2Y8 2422 aa15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 SULT2B1O00204 365 aa15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 XKRYO14609 159 aa15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 MYL12BO14950 172 aa15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 NME2P1O60361 137 aa15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 SERPINI2O75830 405 aa15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 AKR7A3O95154 331 aa15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 GYPBP06028 91 aa15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 SPI1P17947 270 aa15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 NME2P22392 152 aa15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 GDF1P27539 372 aa15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 MED22Q15528 200 aa15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 ZNF239Q16600 458 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 B3GLCTQ6Y288 498 aa15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 SHFQ7M4L6 423 aa15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 PXKQ7Z7A4 578 aa15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 YRDCQ86U90 279 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 ZNF519Q8TB69 540 aa15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 YIPF6Q96EC8 236 aa15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 OR5M11Q96RB7 305 aa15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 FUNDC2Q9BWH2 189 aa15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 ASB6Q9NWX5 421 aa15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 LSM2Q9Y333 95 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-224ENST00000600718 A0A1W2PNV4 684 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 TMEM129A0AVI4 362 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 KLRC4-KLRK1H3BQV0 150 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 ARHGEF9O43307 516 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 NOL3O60936 208 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 TRAPPC6AO75865 159 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 ACVR1BP36896 505 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 DIO1P49895 249 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 ARG2P78540 354 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 C19orf57Q0VDD7 668 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 C1DQ13901 141 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 SPHARQ15513 63 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 DEFB109BQ30KR1 87 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 ANKRD13BQ86YJ7 626 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 ACBD7Q8N6N7 88 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 ZPLD1Q8TCW7 415 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 BORCS5Q969J3 196 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 C12orf43Q96C57 262 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 MGLLQ99685 303 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 DOK1Q99704 481 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 HES7Q9BYE0 225 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 MOKQ9UQ07 419 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 CUL9Q8IWT3 2517 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 A6NIZ1 184 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 SEC14L5O43304 696 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 PLGP00747 810 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 SBK2P0C263 348 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 DAP3P51398 398 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 RAP1BP61224 184 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 RAP1AP62834 184 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 GGTLC2Q14390 218 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 ARMCX4Q5H9R4 360 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 GHDCQ8N2G8 530 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 KDM8Q8N371 416 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 TMEM99Q8N816 258 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 EXD3Q8N9H8 876 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 SCNM1Q9BWG6 230 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 RPRD1BQ9NQG5 326 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 INPP5EQ9NRR6 644 aa15.84■□□□□ 0.13
SHKBP1-224ENST00000600718 DMXL1Q9Y485 3027 aa15.83■□□□□ 0.12
SHKBP1-224ENST00000600718 LINC01387J3KSC0 135 aa15.83■□□□□ 0.12
SHKBP1-224ENST00000600718 KLK10O43240 276 aa15.83■□□□□ 0.12
SHKBP1-224ENST00000600718 GLCEO94923 617 aa15.83■□□□□ 0.12
SHKBP1-224ENST00000600718 LIMS3P0CW19 117 aa15.83■□□□□ 0.12
SHKBP1-224ENST00000600718 LIMS4P0CW20 117 aa15.83■□□□□ 0.12
SHKBP1-224ENST00000600718 ZNF12P17014 697 aa15.83■□□□□ 0.12
SHKBP1-224ENST00000600718 HSF1Q00613 529 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms