RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 UTS2BQ765I0 119 aa3.55□□□□□ -1.84
LINC00557-201ENST00000563184 PSTKQ8IV42 348 aaKnown RBP3.55□□□□□ -1.84
LINC00557-201ENST00000563184 OR4F15Q8NGB8 312 aa3.55□□□□□ -1.84
LINC00557-201ENST00000563184 SHC3Q92529 594 aa3.55□□□□□ -1.84
LINC00557-201ENST00000563184 OR8B4Q96RC9 309 aa3.55□□□□□ -1.84
LINC00557-201ENST00000563184 RIOK1Q9BRS2 568 aaKnown RBP3.55□□□□□ -1.84
LINC00557-201ENST00000563184 ADAP2Q9NPF8 381 aa3.55□□□□□ -1.84
LINC00557-201ENST00000563184 GLRX2Q9NS18 164 aa3.55□□□□□ -1.84
LINC00557-201ENST00000563184 SPATA7Q9P0W8 599 aa3.55□□□□□ -1.84
LINC00557-201ENST00000563184 PEX16Q9Y5Y5 336 aa3.55□□□□□ -1.84
LINC00557-201ENST00000563184 PIKFYVEQ9Y2I7 2098 aa3.55□□□□□ -1.84
LINC00557-201ENST00000563184 FAM240BA0A1B0GVZ2 78 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 CCDC182A6NF36 153 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 IGHV2-5P01817 119 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 FGF1P05230 155 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 UBTFL1P0CB47 393 aaPredicted RBP3.54□□□□□ -1.84
LINC00557-201ENST00000563184 EPS15P42566 896 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 YAP1P46937 504 aaKnown RBP3.54□□□□□ -1.84
LINC00557-201ENST00000563184 CSNK1DP48730 415 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 FGF8P55075 233 aaPredicted RBP3.54□□□□□ -1.84
LINC00557-201ENST00000563184 UCNP55089 124 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 ERVK-25P63136 954 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 FZD2Q14332 565 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 IMMTQ16891 758 aaKnown RBP3.54□□□□□ -1.84
LINC00557-201ENST00000563184 LCN12Q6JVE5 192 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 TRIM40Q6P9F5 258 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 LRRC31Q6UY01 552 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 EGFL6Q8IUX8 553 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 ZADH2Q8N4Q0 377 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 Q8N9L7 120 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 OR51G1Q8NGK1 321 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 OR10G9Q8NGN4 311 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 OR6X1Q8NH79 312 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 ZFP14Q9HCL3 533 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 SUN2Q9UH99 717 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 SLC7A8Q9UHI5 535 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 NUFIP1Q9UHK0 495 aaKnown RBP3.54□□□□□ -1.84
LINC00557-201ENST00000563184 LRP4O75096 1905 aa3.54□□□□□ -1.84
LINC00557-201ENST00000563184 KANK1Q14678 1352 aa3.53□□□□□ -1.84
LINC00557-201ENST00000563184 TET2Q6N021 2002 aaPredicted RBP3.53□□□□□ -1.84
LINC00557-201ENST00000563184 CDHR2Q9BYE9 1310 aa3.53□□□□□ -1.84
LINC00557-201ENST00000563184 ERVV-1B6SEH8 477 aa3.53□□□□□ -1.84
LINC00557-201ENST00000563184 SLC31A2O15432 143 aa3.53□□□□□ -1.84
LINC00557-201ENST00000563184 SERPINA3P01011 423 aa3.53□□□□□ -1.84
LINC00557-201ENST00000563184 MX1P20591 662 aa3.53□□□□□ -1.84
LINC00557-201ENST00000563184 GYG1P46976 350 aa3.53□□□□□ -1.84
LINC00557-201ENST00000563184 TPMTP51580 245 aa3.53□□□□□ -1.84
LINC00557-201ENST00000563184 CCR6P51684 374 aa3.53□□□□□ -1.84
LINC00557-201ENST00000563184 DDX39BQ13838 428 aaKnown RBP3.53□□□□□ -1.84
LINC00557-201ENST00000563184 SLC25A48Q6ZT89 311 aaKnown RBP3.53□□□□□ -1.84
LINC00557-201ENST00000563184 TGIF2LXQ8IUE1 241 aa3.53□□□□□ -1.84
LINC00557-201ENST00000563184 ENTHD1Q8IYW4 607 aa3.53□□□□□ -1.84
LINC00557-201ENST00000563184 SORT1Q99523 831 aa3.53□□□□□ -1.84
LINC00557-201ENST00000563184 CLMPQ9H6B4 373 aa3.53□□□□□ -1.84
LINC00557-201ENST00000563184 NT5MQ9NPB1 228 aa3.53□□□□□ -1.84
LINC00557-201ENST00000563184 DMAP1Q9NPF5 467 aaPredicted RBP3.53□□□□□ -1.84
LINC00557-201ENST00000563184 PDS5BQ9NTI5 1447 aa3.53□□□□□ -1.85
LINC00557-201ENST00000563184 ZNFX1Q9P2E3 1918 aaKnown RBP3.52□□□□□ -1.85
LINC00557-201ENST00000563184 IGKV1D-13A0A0B4J2D9 117 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 TMEM50AO95807 157 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 ALDOBP05062 364 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 CT62P0C5K7 136 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 IGKV1-13P0DP09 117 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 SSR1P43307 286 aaKnown RBP3.52□□□□□ -1.85
LINC00557-201ENST00000563184 SGCAQ16586 387 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 AGBL2Q5U5Z8 902 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 ZNF557Q8N988 423 aaPredicted RBP3.52□□□□□ -1.85
LINC00557-201ENST00000563184 OR2L3Q8NG85 312 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 OR4F6Q8NGB9 312 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 DTX3LQ8TDB6 740 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 TUBGCP3Q96CW5 907 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 FAM210BQ96KR6 192 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 MFFQ9GZY8 342 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 DNTTIP1Q9H147 329 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 METTL7AQ9H8H3 244 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 UGT1A7Q9HAW7 530 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 UGT1A10Q9HAW8 530 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 UGT1A8Q9HAW9 530 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 DEC1Q9P2X7 70 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 GNPTGQ9UJJ9 305 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 HEBP2Q9Y5Z4 205 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 ARID1AO14497 2285 aa3.52□□□□□ -1.85
LINC00557-201ENST00000563184 MAP3K15Q6ZN16 1313 aa3.51□□□□□ -1.85
LINC00557-201ENST00000563184 SYNJ2BP-COX16A0A087WUM0 186 aa3.51□□□□□ -1.85
LINC00557-201ENST00000563184 PES1O00541 588 aaKnown RBP3.51□□□□□ -1.85
LINC00557-201ENST00000563184 UPK3AO75631 287 aa3.51□□□□□ -1.85
LINC00557-201ENST00000563184 IGLV2-23P01705 113 aa3.51□□□□□ -1.85
LINC00557-201ENST00000563184 GKN3PP0CG01 181 aa3.51□□□□□ -1.85
LINC00557-201ENST00000563184 TCN1P20061 433 aaPredicted RBP3.51□□□□□ -1.85
LINC00557-201ENST00000563184 KITLGP21583 273 aa3.51□□□□□ -1.85
LINC00557-201ENST00000563184 GPR6P46095 362 aaPredicted RBP3.51□□□□□ -1.85
LINC00557-201ENST00000563184 GUCA2BQ16661 112 aa3.51□□□□□ -1.85
LINC00557-201ENST00000563184 RSPO1Q2MKA7 263 aaPredicted RBP3.51□□□□□ -1.85
LINC00557-201ENST00000563184 RFX4Q33E94 735 aa3.51□□□□□ -1.85
LINC00557-201ENST00000563184 CNIH2Q6PI25 160 aa3.51□□□□□ -1.85
LINC00557-201ENST00000563184 RUFY3Q7L099 469 aa3.51□□□□□ -1.85
LINC00557-201ENST00000563184 PUSL1Q8N0Z8 303 aaKnown RBP3.51□□□□□ -1.85
LINC00557-201ENST00000563184 OR1N2Q8NGR9 330 aa3.51□□□□□ -1.85
LINC00557-201ENST00000563184 OR2G3Q8NGZ4 309 aa3.51□□□□□ -1.85
LINC00557-201ENST00000563184 MARCH1Q8TCQ1 289 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms