RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 GALNT11Q8NCW6 608 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 OR51A4Q8NGJ6 313 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 OR1S2Q8NGQ3 325 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 WDR83Q9BRX9 315 aaKnown RBP7.24□□□□□ -1.25
VPS13D-211ENST00000543710 TRAV18A0A075B6X5 111 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 hCG_1807616A0A1W2PRN6 198 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 TARM1B6A8C7 271 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 GPR75O95800 540 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 SLC35E2P0CK97 266 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 SLC2A5P22732 501 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 APOBEC1P41238 236 aaKnown RBP7.23□□□□□ -1.25
VPS13D-211ENST00000543710 NKPD1Q17RQ9 610 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 OR2A2Q6IF42 318 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 SYS1Q8N2H4 156 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 GIMAP1Q8WWP7 306 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 RND1Q92730 232 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 TAAR8Q969N4 342 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 SLC25A46Q96AG3 418 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 SHISA4Q96DD7 197 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 MAP6Q96JE9 813 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 ANKRD34BA5PLL1 514 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 NKX6-3A6NJ46 265 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 OR7A17O14581 309 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 FPR2P25090 351 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 GGT5P36269 586 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 NAA10P41227 235 aaPredicted RBP7.23□□□□□ -1.25
VPS13D-211ENST00000543710 EPHA5P54756 1037 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 P2RY14Q15391 338 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 BEND4Q6ZU67 534 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 GDF7Q7Z4P5 450 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 MDGA2Q7Z553 956 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 UTP4Q969X6 686 aaKnown RBP7.23□□□□□ -1.25
VPS13D-211ENST00000543710 C4orf36Q96KX1 117 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 OCSTAMPQ9BR26 566 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 NICN1Q9BSH3 213 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 CHRNA9Q9UGM1 479 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 C17orf105B2RV13 164 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 TRAPPC2LH3BP13 241 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 DSCR3O14972 297 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF354AO60765 605 aaPredicted RBP7.23□□□□□ -1.25
VPS13D-211ENST00000543710 FURINP09958 794 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF16P17020 682 aaPredicted RBP7.23□□□□□ -1.25
VPS13D-211ENST00000543710 PTH2RP49190 550 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 FXYD6P3P58550 94 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 ALKBH1Q13686 389 aaKnown RBP7.23□□□□□ -1.25
VPS13D-211ENST00000543710 C21orf62-AS1Q17RA5 79 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 EML3Q32P44 896 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 FBXO48Q5FWF7 155 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 RNLSQ5VYX0 342 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 SUSD1Q6UWL2 747 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 TRAPPC6BQ86SZ2 158 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 SKA3Q8IX90 412 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 OR56B2PQ8NGI1 322 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 ZFP90Q8TF47 636 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 CCDC120Q96HB5 630 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 TMEM68Q96MH6 324 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 PIGQQ9BRB3 760 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 ALOXE3Q9BYJ1 711 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 C20orf85Q9H1P6 137 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 C1orf198Q9H425 327 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 EGLN3Q9H6Z9 239 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 SMCO4Q9NRQ5 59 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 SLC23A1Q9UHI7 598 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 OSGIN1Q9UJX0 560 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 PROCRQ9UNN8 238 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 TCRBV5S1A1TA0A578 114 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 ARPC1BO15143 372 aaKnown RBP7.23□□□□□ -1.25
VPS13D-211ENST00000543710 CACNG3O60359 315 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 HTR2CP28335 458 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 ALDH3B1P43353 468 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 DYRK1AQ13627 763 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 HTR4Q13639 388 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 SLC36A2Q495M3 483 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 DOK3Q7L591 496 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 CAMKMTQ7Z624 323 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 SCD5Q86SK9 330 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 SMRP1Q8NCR6 262 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 FAM83FQ8NEG4 500 aaPredicted RBP7.23□□□□□ -1.25
VPS13D-211ENST00000543710 GLYATL2Q8WU03 294 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 A0A087WV62 115 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 LOC105369274A0A096LPK9 316 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 TMEM82A0PJX8 343 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 A8MVM7 634 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 F6UZH7 168 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 HPGDSO60760 199 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 SOD1P00441 154 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 HLA-HP01893 362 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 CYC1P08574 325 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 SLC5A2P31639 672 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 DAPP51397 102 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 SHC2P98077 582 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 SOX4Q06945 474 aaPredicted RBP7.23□□□□□ -1.25
VPS13D-211ENST00000543710 DPTQ07507 201 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 HES5Q5TA89 166 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 CLECL1Q8IZS7 167 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 OR4N4Q8N0Y3 316 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 ACOT4Q8N9L9 421 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 OR4N2Q8NGD1 307 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 OR52B6Q8NGF0 335 aa7.23□□□□□ -1.25
VPS13D-211ENST00000543710 NT5CQ8TCD5 201 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms