RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 AKR1C3P42330 323 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 DVL1P1P54792 670 aaPredicted RBP12.67□□□□□ -0.38
HDAC1-206ENST00000476391 HTRA3P83110 453 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 PRKCZQ05513 592 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 DHRS2Q13268 280 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 TOMM20Q15388 145 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 OR7A5Q15622 319 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 STPG1Q5TH74 334 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 MRM1Q6IN84 353 aaKnown RBP12.67□□□□□ -0.38
HDAC1-206ENST00000476391 ANKRD33Q7Z3H0 272 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 ISOC2Q96AB3 205 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 OR5B2Q96R09 309 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 ACTRT3Q9BYD9 372 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 OR51V1Q9H2C8 321 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 SEMA6CQ9H3T2 930 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 PAPPA2Q9BXP8 1791 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 MAGEB4O15481 346 aaPredicted RBP12.67□□□□□ -0.38
HDAC1-206ENST00000476391 ZNF208O43345 1280 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 SLCO2B1O94956 709 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 SLC16A8O95907 504 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 IGSF6O95976 241 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 CTSLP07711 333 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 CHRM4P08173 479 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 ITGA5P08648 1049 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 ATP1B2P14415 290 aaPredicted RBP12.67□□□□□ -0.38
HDAC1-206ENST00000476391 PGAM2P15259 253 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 BMP7P18075 431 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 TGIF1Q15583 401 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 TP53I3Q53FA7 332 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 AWAT1Q58HT5 328 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 STEAP1BQ6NZ63 245 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 UBAC2Q8NBM4 344 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 LCN9Q8WX39 176 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 KIRREL1Q96J84 757 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 SUSD3Q96L08 255 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 TGIF2Q9GZN2 237 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 SLC25A18Q9H1K4 315 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 MBD1Q9UIS9 605 aaPredicted RBP12.67□□□□□ -0.38
HDAC1-206ENST00000476391 NOP16Q9Y3C1 178 aaKnown RBP12.67□□□□□ -0.38
HDAC1-206ENST00000476391 PLXND1Q9Y4D7 1925 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 NUP210Q8TEM1 1887 aaPredicted RBP12.66□□□□□ -0.38
HDAC1-206ENST00000476391 FRMPD3Q5JV73 1810 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 CPED1A4D0V7 1026 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 MOSPD3O75425 235 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 CATP04040 527 aaKnown RBP12.66□□□□□ -0.38
HDAC1-206ENST00000476391 SLC2A5P22732 501 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 ZNF750Q32MQ0 723 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 PRAMEF8Q5VWM4 474 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 PRAMEF7Q5VXH5 474 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 DND1Q8IYX4 353 aaKnown RBP12.66□□□□□ -0.38
HDAC1-206ENST00000476391 OR5T3Q8NGG3 340 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 ADAMTS17Q8TE56 1095 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 SEC22AQ96IW7 307 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 LMAN1LQ9HAT1 526 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 CYTL1Q9NRR1 136 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.66□□□□□ -0.38
HDAC1-206ENST00000476391 MKRN2OSH3BPM6 223 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 NARSO43776 548 aaKnown RBP12.66□□□□□ -0.38
HDAC1-206ENST00000476391 OR10H2O60403 315 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 GNRH1P01148 92 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 RNH1P13489 461 aaKnown RBP12.66□□□□□ -0.38
HDAC1-206ENST00000476391 CD80P33681 288 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 KHKP50053 298 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 TAF10Q12962 218 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 KIAA0141Q14154 515 aaPredicted RBP12.66□□□□□ -0.38
HDAC1-206ENST00000476391 RSU1Q15404 277 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 PRAMEF17Q5VTA0 474 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 TMED4Q7Z7H5 227 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 HMGN2P46Q86SG4 172 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 FAM24BQ8N5W8 94 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 ZNF511Q8NB15 262 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 CLEC1AQ8NC01 280 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 OR4E2Q8NGC2 313 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 BRI3BPQ8WY22 251 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 RAB24Q969Q5 203 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 TCTN2Q96GX1 697 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 AKR1E2Q96JD6 320 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 S100A13Q99584 98 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 PDCD1LG2Q9BQ51 273 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 SELENOIQ9C0D9 397 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 GDF2Q9UK05 429 aaPredicted RBP12.66□□□□□ -0.38
HDAC1-206ENST00000476391 KCNIP3Q9Y2W7 256 aa12.66□□□□□ -0.38
HDAC1-206ENST00000476391 TRIP12Q14669 1992 aaPredicted RBP12.65□□□□□ -0.38
HDAC1-206ENST00000476391 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.65□□□□□ -0.38
HDAC1-206ENST00000476391 UNC119BA6NIH7 251 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 OR52A4PA6NMU1 304 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 SEC14L6B5MCN3 397 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 VNN2O95498 520 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 CD3DP04234 171 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 SNRNP70P08621 437 aaKnown RBP12.65□□□□□ -0.38
HDAC1-206ENST00000476391 HKR1P10072 659 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 IL9P15248 144 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 C5AR1P21730 350 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 SLC26A5P58743 744 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 ACY1Q03154 408 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 GAMTQ14353 236 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 MLC1Q15049 377 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 AWAT2Q6E213 333 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 UNQ6494/PRO21346Q6UXR6 183 aa12.65□□□□□ -0.38
HDAC1-206ENST00000476391 OLIG3Q7RTU3 272 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms