RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 MEX3BQ6ZN04 569 aaKnown RBP18.22■□□□□ 0.51
SHANK1-203ENST00000391813 OR51D1Q8NGF3 324 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 RTP3Q9BQQ7 232 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 P2RY12Q9H244 342 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 POMT2Q9UKY4 750 aa18.22■□□□□ 0.51
SHANK1-203ENST00000391813 NPIPA5A0A0B4J1W7 369 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 LOC100289279A0A1B0GTE1 492 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 NPIPA7E9PJI5 369 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 SLC16A7O60669 478 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 LGI1O95970 557 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 NPIPA8P0DM63 369 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 CCNOP22674 350 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 ALKBH1Q13686 389 aaKnown RBP18.21■□□□□ 0.51
SHANK1-203ENST00000391813 FAM213BQ8TBF2 198 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 RAB3CQ96E17 227 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 HHIPQ96QV1 700 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 NAA11Q9BSU3 229 aaPredicted RBP18.21■□□□□ 0.51
SHANK1-203ENST00000391813 REV1Q9UBZ9 1251 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 SIT1Q9Y3P8 196 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 IGLV3-10A0A075B6K4 115 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 TAAR5O14804 337 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 STK17BO94768 372 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 UEVLDQ8IX04 471 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 OR51S1Q8NGJ8 323 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 FAM3DQ96BQ1 224 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 DDIT4LQ96D03 193 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 DNAJA3Q96EY1 480 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 FGF20Q9NP95 211 aaPredicted RBP18.21■□□□□ 0.51
SHANK1-203ENST00000391813 RARRES3Q9UL19 164 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 A0A1B0GUL6 1792 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 MMP2P08253 660 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 ZNF888P0CJ79 500 aaPredicted RBP18.21■□□□□ 0.51
SHANK1-203ENST00000391813 CD1EP15812 388 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 FABP5Q01469 135 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 SMAD4Q13485 552 aaKnown RBP18.21■□□□□ 0.51
SHANK1-203ENST00000391813 ZNF266Q14584 549 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 SLC22A6Q4U2R8 563 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 OR7E24Q6IFN5 339 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 ZNF561Q8N587 486 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 TOE1Q96GM8 510 aaKnown RBP18.21■□□□□ 0.51
SHANK1-203ENST00000391813 TNFRSF13CQ96RJ3 184 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 ARHGAP9Q9BRR9 750 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 APOOQ9BUR5 198 aa18.21■□□□□ 0.51
SHANK1-203ENST00000391813 ZNF768Q9H5H4 540 aaKnown RBP18.21■□□□□ 0.51
SHANK1-203ENST00000391813 POU3F3P20264 500 aaPredicted RBP18.21■□□□□ 0.5
SHANK1-203ENST00000391813 TACR3P29371 465 aa18.21■□□□□ 0.5
SHANK1-203ENST00000391813 RAG2P55895 527 aa18.21■□□□□ 0.5
SHANK1-203ENST00000391813 TAS2R30P59541 319 aa18.21■□□□□ 0.5
SHANK1-203ENST00000391813 IL22RA1Q8N6P7 574 aa18.21■□□□□ 0.5
SHANK1-203ENST00000391813 TGIF2Q9GZN2 237 aa18.21■□□□□ 0.5
SHANK1-203ENST00000391813 PRSS16Q9NQE7 514 aa18.21■□□□□ 0.5
SHANK1-203ENST00000391813 CYB5R1Q9UHQ9 305 aa18.21■□□□□ 0.5
SHANK1-203ENST00000391813 XIRP1Q702N8 1843 aaKnown RBP18.2■□□□□ 0.5
SHANK1-203ENST00000391813 MRPL19P49406 292 aaKnown RBP18.2■□□□□ 0.5
SHANK1-203ENST00000391813 CCNJQ5T5M9 372 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 ALKBH2Q6NS38 261 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 PAQR6Q6TCH4 344 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 FBXW12Q6X9E4 464 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 COX15Q7KZN9 410 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 CMIPQ8IY22 773 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 C2CD4CQ8TF44 421 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 DUSP23Q9BVJ7 150 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 SLC23A1Q9UHI7 598 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 PURGQ9UJV8 347 aaKnown RBP18.2■□□□□ 0.5
SHANK1-203ENST00000391813 SCGB1D1O95968 90 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 EPHA2P29317 976 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 HHEXQ03014 270 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 CARD17Q5XLA6 110 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 GDF7Q7Z4P5 450 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 KCNRGQ8N5I3 272 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 TAAR8Q969N4 342 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 SPTSSAQ969W0 71 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 TSACCQ96A04 125 aaPredicted RBP18.2■□□□□ 0.5
SHANK1-203ENST00000391813 CHST8Q9H2A9 424 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 ACOXLQ9NUZ1 547 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 DKKL1Q9UK85 242 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 ATXN7L1Q9ULK2 861 aaPredicted RBP18.2■□□□□ 0.5
SHANK1-203ENST00000391813 M0R082 166 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 ACSM4P0C7M7 580 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 CPMP14384 443 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 NAGAP17050 411 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 KIR2DS3Q14952 304 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 C1orf53Q5VUE5 145 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 ZFP82Q8N141 532 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 NAT6Q93015 286 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 RHNO1Q9BSD3 238 aa18.2■□□□□ 0.5
SHANK1-203ENST00000391813 LRIT2A6NDA9 550 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 MYOGP15173 224 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 RAB31Q13636 194 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 ADGRG3Q86Y34 549 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 CSF3RQ99062 836 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 TEAD3Q99594 435 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 MS4A8Q9BY19 250 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 SLC25A19Q9HC21 320 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 MSTNO14793 375 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 CER1O95813 267 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 RPL34P49207 117 aaKnown RBP18.19■□□□□ 0.5
SHANK1-203ENST00000391813 CD300CQ08708 224 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 ACSM5Q6NUN0 579 aa18.19■□□□□ 0.5
SHANK1-203ENST00000391813 RBMS3Q6XE24 437 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms