RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 ASCL5Q7RTU5 278 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 JAZF1Q86VZ6 243 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 TMPRSS12Q86WS5 348 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 KLBQ86Z14 1044 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 OR6V1Q8N148 313 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 MFSD8Q8NHS3 518 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 ZHX1-C8orf76Q96EF9 292 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 DCLRE1CQ96SD1 692 aaKnown RBP16.57■□□□□ 0.24
USP39-201ENST00000323701 DCSTAMPQ9H295 470 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 SYT4Q9H2B2 425 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 RERGLQ9H628 205 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 INIPQ9NRY2 104 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 WDR70Q9NW82 654 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 RHBDL2Q9NX52 303 aa16.57■□□□□ 0.24
USP39-201ENST00000323701 E9PI62 339 aa16.56■□□□□ 0.24
USP39-201ENST00000323701 ARHGEF9O43307 516 aa16.56■□□□□ 0.24
USP39-201ENST00000323701 GPR85P60893 370 aa16.56■□□□□ 0.24
USP39-201ENST00000323701 RPS25P62851 125 aaKnown RBP16.56■□□□□ 0.24
USP39-201ENST00000323701 TMED1Q13445 227 aa16.56■□□□□ 0.24
USP39-201ENST00000323701 MELKQ14680 651 aa16.56■□□□□ 0.24
USP39-201ENST00000323701 TIGD3Q6B0B8 471 aa16.56■□□□□ 0.24
USP39-201ENST00000323701 PM20D2Q8IYS1 436 aa16.56■□□□□ 0.24
USP39-201ENST00000323701 KLHL36Q8N4N3 616 aa16.56■□□□□ 0.24
USP39-201ENST00000323701 DDIT4LQ96D03 193 aa16.56■□□□□ 0.24
USP39-201ENST00000323701 C5orf34Q96MH7 638 aa16.56■□□□□ 0.24
USP39-201ENST00000323701 TM9SF2Q99805 663 aa16.56■□□□□ 0.24
USP39-201ENST00000323701 PRRX2Q99811 253 aa16.56■□□□□ 0.24
USP39-201ENST00000323701 PTGES2Q9H7Z7 377 aa16.56■□□□□ 0.24
USP39-201ENST00000323701 STMN3Q9NZ72 180 aa16.56■□□□□ 0.24
USP39-201ENST00000323701 SF3B6Q9Y3B4 125 aaKnown RBP16.56■□□□□ 0.24
USP39-201ENST00000323701 SPENQ96T58 3664 aaKnown RBP16.56■□□□□ 0.24
USP39-201ENST00000323701 ZNF814B7Z6K7 855 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 M0R3G1 203 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 DPP4P27487 766 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 SFTPDP35247 375 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 GALEQ14376 348 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 GGTLC2Q14390 218 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 PON3Q15166 354 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 ARMC4Q5T2S8 1044 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 SPINK14Q6IE38 97 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 C5orf46Q6UWT4 87 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 ARIH2OSQ8N7S6 290 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 OR1J4Q8NGS1 313 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 OR52N1Q8NH53 320 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 ZNF519Q8TB69 540 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 SGCZQ96LD1 299 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 ALG12Q9BV10 488 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 COPS3Q9UNS2 423 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 TRIM3O75382 744 aaPredicted RBP16.55■□□□□ 0.24
USP39-201ENST00000323701 RFPL3SP0C7P2 107 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 IDUAP35475 653 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 ACVR1BP36896 505 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 OR12D2P58182 307 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 TPBGQ13641 420 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 INSL4Q14641 139 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 VASH2Q86V25 355 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 RAB43Q86YS6 212 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 CROCCP3Q8IVE0 287 aa16.55■□□□□ 0.24
USP39-201ENST00000323701 PINLYPA6NC86 204 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.54■□□□□ 0.24
USP39-201ENST00000323701 RPL27P61353 136 aaKnown RBP16.54■□□□□ 0.24
USP39-201ENST00000323701 PUDPQ08623 228 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 EMC4Q5J8M3 183 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 C3orf33Q6P1S2 294 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 DND1Q8IYX4 353 aaKnown RBP16.54■□□□□ 0.24
USP39-201ENST00000323701 NXPE2Q96DL1 559 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 FOXN4Q96NZ1 517 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 POTEKPQ9BYX7 375 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 B3GNT4Q9C0J1 378 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 SLIRPQ9GZT3 109 aaKnown RBP16.54■□□□□ 0.24
USP39-201ENST00000323701 NUAK2Q9H093 628 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 TXNIPQ9H3M7 391 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 CAB39Q9Y376 341 aaPredicted RBP16.54■□□□□ 0.24
USP39-201ENST00000323701 PRR32B1ATL7 298 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 CLPXO76031 633 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 OR6A2O95222 327 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 PSKH1P11801 424 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 CELP19835 753 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 CD96P40200 585 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 BMXP51813 675 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 SLC25A1P53007 311 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 TMEM176BQ3YBM2 270 aaPredicted RBP16.54■□□□□ 0.24
USP39-201ENST00000323701 GPR139Q6DWJ6 353 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 RPTNQ6XPR3 784 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 H1FNTQ75WM6 255 aaPredicted RBP16.54■□□□□ 0.24
USP39-201ENST00000323701 OR6S1Q8NH40 331 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 ABTB1Q969K4 478 aaPredicted RBP16.54■□□□□ 0.24
USP39-201ENST00000323701 TXNDC15Q96J42 360 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 SIGLEC12Q96PQ1 595 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 OR5B2Q96R09 309 aa16.54■□□□□ 0.24
USP39-201ENST00000323701 CNN2Q99439 309 aaKnown RBP16.54■□□□□ 0.24
USP39-201ENST00000323701 EXOSC4Q9NPD3 245 aaKnown RBP16.54■□□□□ 0.24
USP39-201ENST00000323701 TVP23AA6NH52 213 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 LRRC3CA6NJW4 275 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 DVL2O14641 736 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 RAMP1O60894 148 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 GLCEO94923 617 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 CSRP1P21291 193 aaKnown RBP16.53■□□□□ 0.24
USP39-201ENST00000323701 ITGA3P26006 1051 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 RPS27P42677 84 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms