RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 ST8SIA1Q92185 356 aa7.88□□□□□ -1.15
CALCOCO2-201ENST00000258947 LOXL4Q96JB6 756 aa7.88□□□□□ -1.15
CALCOCO2-201ENST00000258947 CCNL2Q96S94 520 aaPredicted RBP7.88□□□□□ -1.15
CALCOCO2-201ENST00000258947 PDCD1LG2Q9BQ51 273 aa7.88□□□□□ -1.15
CALCOCO2-201ENST00000258947 CCDC86Q9H6F5 360 aaKnown RBP7.88□□□□□ -1.15
CALCOCO2-201ENST00000258947 ADGRL4Q9HBW9 690 aa7.88□□□□□ -1.15
CALCOCO2-201ENST00000258947 ACOXLQ9NUZ1 547 aa7.88□□□□□ -1.15
CALCOCO2-201ENST00000258947 C14orf119Q9NWQ9 140 aa7.88□□□□□ -1.15
CALCOCO2-201ENST00000258947 STMN3Q9NZ72 180 aa7.88□□□□□ -1.15
CALCOCO2-201ENST00000258947 HIF3AQ9Y2N7 669 aa7.88□□□□□ -1.15
CALCOCO2-201ENST00000258947 RTTNQ86VV8 2226 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 CCDC187A0A096LP49 1063 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 SPAARA0A1B0GVQ0 90 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 A0A1W2PPL8 197 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 MT-ATP6P00846 226 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 UMODP07911 640 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 TACSTD2P09758 323 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 RBMS1P29558 406 aaKnown RBP7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 RFC3P40938 356 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 CASRP41180 1078 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 APOBEC1P41238 236 aaKnown RBP7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 TAS2R43P59537 309 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 DEFA1P59665 94 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 DEFA3P59666 94 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 PCOLCEQ15113 449 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 FNDC7Q5VTL7 733 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 TMEM205Q6UW68 189 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 KRT77Q7Z794 578 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 ATCAYQ86WG3 371 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 RFLNBQ8N5W9 214 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 BMPERQ8N8U9 685 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 FAM71CQ8NEG0 241 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 OR13C5Q8NGS8 318 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 TSEN15Q8WW01 171 aaKnown RBP7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 GHSRQ92847 366 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 KIAA1143Q96AT1 154 aaPredicted RBP7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 ZNF524Q96C55 264 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 TRMT61AQ96FX7 289 aaKnown RBP7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 TSPAN32Q96QS1 320 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 INTS14Q96SY0 518 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 SLIRPQ9GZT3 109 aaKnown RBP7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 TSPAN10Q9H1Z9 355 aaPredicted RBP7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 IGHV1-45A0A0A0MS14 117 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 METTL15A6NJ78 407 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 E9PI62 339 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 IDH3BO43837 385 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 RGS9O75916 674 aaPredicted RBP7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 GLCEO94923 617 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 GUSBP08236 651 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 OR2T7P0C7T2 308 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 PRKAR1AP10644 381 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 ICAM2P13598 275 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 ZNF43P17038 809 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 IL11P20809 199 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 TALDO1P37837 337 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 DIO1P49895 249 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 GDI2P50395 445 aaKnown RBP7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 FOXK1P85037 733 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 INSM1Q01101 510 aaPredicted RBP7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 TAF13Q15543 124 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 FAM27D1Q5T7N8 215 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 ZNF385CQ66K41 422 aaPredicted RBP7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 MRGPREQ86SM8 312 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 OR2T27Q8NH04 317 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 RBP7Q96R05 134 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 NPAS1Q99742 590 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 SLC30A2Q9BRI3 323 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 EXO5Q9H790 373 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 TIGARQ9NQ88 270 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 ABI3Q9P2A4 366 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 LSM2Q9Y333 95 aaKnown RBP7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 MRPS18BQ9Y676 258 aaKnown RBP7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 FABP12A6NFH5 140 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 B4E171 279 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 ARPC3O15145 178 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 WISP1O95388 367 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 CCL3P10147 92 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 CD59P13987 128 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 TSPAN7P41732 249 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 CRYBB2P43320 205 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 CLRN1P58418 232 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 RPL27P61353 136 aaKnown RBP7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 PSPHP78330 225 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 CAMK2DQ13557 499 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 IL18Q14116 193 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 MFSD13AQ14CX5 517 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 SGCBQ16585 318 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 RNASE12Q5GAN4 147 aaKnown RBP7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 LINC00114Q6XXX2 140 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 SSX6Q7RTT6 188 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 UEVLDQ8IX04 471 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 ARIH2OSQ8N7S6 290 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 NPEPL1Q8NDH3 523 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 OR6N1Q8NGY5 312 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 FOXJ2Q9P0K8 574 aa7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 PPIEQ9UNP9 301 aaKnown RBP7.87□□□□□ -1.15
CALCOCO2-201ENST00000258947 E9PQ18 207 aa7.86□□□□□ -1.15
CALCOCO2-201ENST00000258947 KLF7O75840 302 aaPredicted RBP7.86□□□□□ -1.15
CALCOCO2-201ENST00000258947 HNRNPCP07910 306 aaKnown RBP eCLIP7.86□□□□□ -1.153e-6■■■□□ 14.7
CALCOCO2-201ENST00000258947 CD63P08962 238 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms