RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 LIN28AQ9H9Z2 209 aaKnown RBP11.9□□□□□ -0.5
SLIRP-201ENST00000238688 ALKBH4Q9NXW9 302 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 LUZP4Q9P127 313 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 TRAPPC4Q9Y296 219 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 CAB39Q9Y376 341 aaPredicted RBP11.9□□□□□ -0.5
SLIRP-201ENST00000238688 NOX1Q9Y5S8 564 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 TMEM72A0PK05 275 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 A6NIZ1 184 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 GJE1A6NN92 205 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 TTLL8A6PVC2 850 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 MCIDASD6RGH6 385 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 FTCDNL1E5RQL4 147 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 J3QRE1 110 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 CBR3O75828 277 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 OR6A2O95222 327 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 PTHP01270 115 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 P04436 131 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 CD36P16671 472 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 IDUAP35475 653 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 SERPINB10P48595 397 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 CYB561P49447 251 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 RGS6P49758 472 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 RAP1BP61224 184 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 RAP1AP62834 184 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 RPL18Q07020 188 aaKnown RBP11.89□□□□□ -0.51
SLIRP-201ENST00000238688 MRPL28Q13084 256 aaKnown RBP11.89□□□□□ -0.51
SLIRP-201ENST00000238688 LSAMPQ13449 338 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 PON3Q15166 354 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 TOMM34Q15785 309 aaPredicted RBP11.89□□□□□ -0.51
SLIRP-201ENST00000238688 ARMCX4Q5H9R4 360 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 ACER2Q5QJU3 275 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 DESI1Q6ICB0 168 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 PLBD1Q6P4A8 553 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 SLC16A12Q6ZSM3 486 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 JAZF1Q86VZ6 243 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 MEX3DQ86XN8 651 aaKnown RBP11.89□□□□□ -0.51
SLIRP-201ENST00000238688 GALNT16Q8N428 558 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 KLHL36Q8N4N3 616 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 KBTBD8Q8NFY9 601 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 CPT1CQ8TCG5 803 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 NMD3Q96D46 503 aaKnown RBP11.89□□□□□ -0.51
SLIRP-201ENST00000238688 MOGAT1Q96PD6 335 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 TEAD3Q99594 435 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 KATNB1Q9BVA0 655 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 MFRPQ9BY79 579 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 INIPQ9NRY2 104 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 GRHPRQ9UBQ7 328 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 GPR52Q9Y2T5 361 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 IER3IP1Q9Y5U9 82 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 A3GALT2U3KPV4 340 aa11.89□□□□□ -0.51
SLIRP-201ENST00000238688 EML6Q6ZMW3 1958 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 DIDO1Q9BTC0 2240 aaKnown RBP11.88□□□□□ -0.51
SLIRP-201ENST00000238688 LOC102725191A0A1B0GVB3 256 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 A0A1W2PNV4 684 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 HSPB2A8KAH6 182 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 CENPBD1B2RD01 187 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 BLOC1S5-TXNDC5H3BN57 136 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 GNB5O14775 395 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 RENP00797 406 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 LCKP06239 509 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 OR2T7P0C7T2 308 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 GAAP10253 952 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 NR2C1P13056 603 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 GNLYP22749 145 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 PSMA1P25786 263 aaKnown RBP11.88□□□□□ -0.51
SLIRP-201ENST00000238688 UGT2B10P36537 528 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 DAP3P51398 398 aaKnown RBP11.88□□□□□ -0.51
SLIRP-201ENST00000238688 ACTA2P62736 377 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 ACTG2P63267 376 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 TPBGQ13641 420 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 CRMP1Q14194 572 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 MED22Q15528 200 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 TRAM1Q15629 374 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 INPP5JQ15735 1006 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-201ENST00000238688 HSPB2Q16082 182 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 CTF1Q16619 201 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 PLEKHN1Q494U1 663 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-201ENST00000238688 TIGD3Q6B0B8 471 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 IGFL3Q6UXB1 125 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 IL20RBQ6UXL0 311 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 C16orf47Q6ZP98 133 aaPredicted RBP11.88□□□□□ -0.51
SLIRP-201ENST00000238688 CLEC1AQ8NC01 280 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 FAM98AQ8NCA5 519 aaKnown RBP11.88□□□□□ -0.51
SLIRP-201ENST00000238688 GALNT11Q8NCW6 608 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 NPEPL1Q8NDH3 523 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 OR1J4Q8NGS1 313 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 OR2T4Q8NH00 348 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 OR2T27Q8NH04 317 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 FNDC8Q8TC99 324 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 PTP4A1Q93096 173 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 PNPLA2Q96AD5 504 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 DDOQ99489 341 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 RNF32Q9H0A6 362 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 TXNIPQ9H3M7 391 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 GALNT9Q9HCQ5 603 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 NDUFB11Q9NX14 153 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 MED11Q9P086 117 aa11.88□□□□□ -0.51
SLIRP-201ENST00000238688 UTP20O75691 2785 aaKnown RBP11.88□□□□□ -0.51
SLIRP-201ENST00000238688 A0A1W2PRG6 482 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 M0R082 166 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms