RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 IL20Q9NYY1 176 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 B3GAT1Q9P2W7 334 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 CDH10Q9Y6N8 788 aa17.69■□□□□ 0.42
PDLIM2-221ENST00000622702 KDM4EB2RXH2 506 aaPredicted RBP17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 NDUFB2O95178 105 aa17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 RCBTB2O95199 551 aa17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 TP53P04637 393 aaPredicted RBP17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 IGFBP5P24593 272 aa17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 AQP2P41181 271 aa17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 SLC16A1P53985 500 aa17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 FXYD6P3P58550 94 aa17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 PDK3Q15120 406 aa17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 RNPS1Q15287 305 aaKnown RBP17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 TAF11Q15544 211 aa17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 LRRC36Q1X8D7 754 aa17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 FBXW10Q5XX13 1052 aa17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 SMARCD3Q6STE5 483 aa17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 PLXDC2Q6UX71 529 aa17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 RPTNQ6XPR3 784 aa17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 KIF18BQ86Y91 864 aa17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 PACRGLQ8N7B6 248 aa17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 MOSPD2Q8NHP6 518 aa17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 FANK1Q8TC84 345 aa17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 MAGEE2Q8TD90 523 aaPredicted RBP17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 CCDC120Q96HB5 630 aa17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 OXGR1Q96P68 337 aa17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 RNF122Q9H9V4 155 aa17.68■□□□□ 0.42
PDLIM2-221ENST00000622702 DIDO1Q9BTC0 2240 aaKnown RBP17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 IGKV3D-15A0A087WSY6 115 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 MBD3L4A6NDZ8 208 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 MBD3L3A6NE82 208 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 WIPF3A6NGB9 483 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 MBD3L5A6NJ08 208 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 ZNF716A6NP11 495 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 E9PLN8 166 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 ZG16O60844 167 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 OSMP13725 252 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 SLC17A1Q14916 467 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 RFX4Q33E94 735 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 ALG10Q5BKT4 473 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 GTF2IRD2BQ6EKJ0 949 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 MTFR2Q6P444 385 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 B3GNT6Q6ZMB0 384 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 NCCRP1Q6ZVX7 275 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 PXKQ7Z7A4 578 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 GTF2IRD2Q86UP8 949 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 LRRC75AQ8NAA5 344 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 MBD3L2Q8NHZ7 208 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 ABHD3Q8WU67 409 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 NRG4Q8WWG1 115 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 GPX7Q96SL4 187 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 TM9SF2Q99805 663 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 VKORC1Q9BQB6 163 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 NDEL1Q9GZM8 345 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 OR52D1Q9H346 318 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 GP6Q9HCN6 339 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 KLHL9Q9P2J3 617 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 ENOPH1Q9UHY7 261 aa17.67■□□□□ 0.42
PDLIM2-221ENST00000622702 AHCYP23526 432 aa17.66■□□□□ 0.42
PDLIM2-221ENST00000622702 RASGEF1BQ0VAM2 473 aa17.66■□□□□ 0.42
PDLIM2-221ENST00000622702 NHLRC1Q6VVB1 395 aa17.66■□□□□ 0.42
PDLIM2-221ENST00000622702 THSD4Q6ZMP0 1018 aa17.66■□□□□ 0.42
PDLIM2-221ENST00000622702 SEM1Q6ZVN7 128 aa17.66■□□□□ 0.42
PDLIM2-221ENST00000622702 P4HA3Q7Z4N8 544 aa17.66■□□□□ 0.42
PDLIM2-221ENST00000622702 KDM8Q8N371 416 aa17.66■□□□□ 0.42
PDLIM2-221ENST00000622702 ANKK1Q8NFD2 765 aa17.66■□□□□ 0.42
PDLIM2-221ENST00000622702 OR9K2Q8NGE7 335 aa17.66■□□□□ 0.42
PDLIM2-221ENST00000622702 DMRTA2Q96SC8 542 aa17.66■□□□□ 0.42
PDLIM2-221ENST00000622702 EGLN3Q9H6Z9 239 aa17.66■□□□□ 0.42
PDLIM2-221ENST00000622702 KLHL13Q9P2N7 655 aa17.66■□□□□ 0.42
PDLIM2-221ENST00000622702 ING1Q9UK53 422 aaPredicted RBP17.66■□□□□ 0.42
PDLIM2-221ENST00000622702 NOX1Q9Y5S8 564 aa17.66■□□□□ 0.42
PDLIM2-221ENST00000622702 MED12LQ86YW9 2145 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 NPIPB13A6NJU9 1138 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 NPIPB4C9JG80 1138 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 C11orf98E9PRG8 122 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 RNF13O43567 381 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 MITFO75030 526 aaPredicted RBP17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 SOX14O95416 240 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 TIMP3P35625 211 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 RAD23AP54725 363 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 ESRRGP62508 458 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 SLC36A3Q495N2 470 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 OR2A2Q6IF42 318 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 GALNT5Q7Z7M9 940 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 GPAT4Q86UL3 456 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 RPRMLQ8N4K4 120 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 C9orf106Q8NAJ2 232 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 PLA2G12AQ9BZM1 189 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 ENKD1Q9H0I2 346 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 RASSF4Q9H2L5 321 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 BCO1Q9HAY6 547 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 INIPQ9NRY2 104 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 GLRX2Q9NS18 164 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 DOCK7Q96N67 2140 aa17.65■□□□□ 0.42
PDLIM2-221ENST00000622702 ALPK2Q86TB3 2170 aa17.64■□□□□ 0.42
PDLIM2-221ENST00000622702 ZNF724A8MTY0 619 aa17.64■□□□□ 0.41
PDLIM2-221ENST00000622702 TRAF3IP2O43734 574 aaPredicted RBP17.64■□□□□ 0.41
PDLIM2-221ENST00000622702 F13BP05160 661 aa17.64■□□□□ 0.41
PDLIM2-221ENST00000622702 ZNF43P17038 809 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms