RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 IP6K3Q96PC2 410 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 RASL11BQ9BPW5 248 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 TMEM175Q9BSA9 504 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 TRPV6Q9H1D0 765 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 ASCL3Q9NQ33 180 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 DNAJC17Q9NVM6 304 aaKnown RBP0.36□□□□□ -2.35
CEP290-208ENST00000604024 TRMT112Q9UI30 125 aaKnown RBP0.36□□□□□ -2.35
CEP290-208ENST00000604024 STARD9Q9P2P6 4700 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 SPAG17Q6Q759 2223 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 MUC22E2RYF6 1773 aaPredicted RBP0.36□□□□□ -2.35
CEP290-208ENST00000604024 ESPL1Q14674 2120 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 SDK1Q7Z5N4 2213 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 ABCA4P78363 2273 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 DMBT1Q9UGM3 2413 aaPredicted RBP0.36□□□□□ -2.35
CEP290-208ENST00000604024 TLCD2A6NGC4 264 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 TCF21O43680 179 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 NME2P1O60361 137 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 CRCPO75575 148 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 LALBAP00709 142 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 ALPPP05187 535 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 RAD52P43351 418 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 HERV-K104P63124 156 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 IFT88Q13099 833 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 SLC39A6Q13433 755 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 CAVIN4Q5BKX8 364 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 LIN9Q5TKA1 542 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 FBXW9Q5XUX1 488 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 ADNP2Q6IQ32 1131 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 C6orf89Q6UWU4 347 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 Q6ZR03 302 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 METTL23Q86XA0 190 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 VRK2Q86Y07 508 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 CCDC83Q8IWF9 413 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 NHLRC2Q8NBF2 726 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 CCDC191Q8NCU4 936 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 CNNM3Q8NE01 707 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 CNDP2Q96KP4 475 aaKnown RBP0.36□□□□□ -2.35
CEP290-208ENST00000604024 NTMT1Q9BV86 223 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 SELENOIQ9C0D9 397 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 NT5C3AQ9H0P0 336 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 RPP21Q9H633 154 aaKnown RBP0.36□□□□□ -2.35
CEP290-208ENST00000604024 TDRD3Q9H7E2 651 aaKnown RBP0.36□□□□□ -2.35
CEP290-208ENST00000604024 SLC38A10Q9HBR0 1119 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 RAB9BQ9NP90 201 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 FAM212BQ9NTI7 297 aaPredicted RBP0.36□□□□□ -2.35
CEP290-208ENST00000604024 AIG1Q9NVV5 245 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 TRPC4Q9UBN4 977 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 ANAPC5Q9UJX4 755 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 MMP17Q9ULZ9 603 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 NDRG2Q9UN36 371 aaKnown RBP0.36□□□□□ -2.35
CEP290-208ENST00000604024 ROCK2O75116 1388 aaKnown RBP0.36□□□□□ -2.35
CEP290-208ENST00000604024 RGPD2P0DJD1 1756 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 KIAA1671Q9BY89 1806 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 DOCK1Q14185 1865 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 PTPRSQ13332 1948 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 TICRRQ7Z2Z1 1910 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 ATG2BQ96BY7 2078 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 ZGRF1Q86YA3 2104 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 NF1P21359 2839 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 SCN10AQ9Y5Y9 1956 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 PLXNB3Q9ULL4 1909 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 PLXND1Q9Y4D7 1925 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 LOC100653049A0A140TA62 436 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 A0A1B0GTQ1 180 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 ZNF705GA8MUZ8 300 aaPredicted RBP0.36□□□□□ -2.35
CEP290-208ENST00000604024 SPECC1L-ADORA2AF8WAN1 911 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 HAS3O00219 553 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 SLC9A3R1O14745 358 aaPredicted RBP0.36□□□□□ -2.35
CEP290-208ENST00000604024 CTAGE5O15320 804 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 ANGPTL7O43827 346 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 KRT34O76011 436 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 SNAI1O95863 264 aaPredicted RBP0.36□□□□□ -2.35
CEP290-208ENST00000604024 JCHAINP01591 159 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 MT-ND3P03897 115 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 KRT7P08729 469 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 EZRP15311 586 aaKnown RBP0.36□□□□□ -2.35
CEP290-208ENST00000604024 DPP4P27487 766 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 MLF1P58340 268 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 CSNK1G2P78368 415 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 ZNF33AQ06730 810 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 PIGHQ14442 188 aaPredicted RBP0.36□□□□□ -2.35
CEP290-208ENST00000604024 DMC1Q14565 340 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 ZSWIM7Q19AV6 140 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 PPM1LQ5SGD2 360 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 APOBEC3HQ6NTF7 200 aaKnown RBP0.36□□□□□ -2.35
CEP290-208ENST00000604024 COPS6Q7L5N1 327 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 NET1Q7Z628 596 aaPredicted RBP0.36□□□□□ -2.35
CEP290-208ENST00000604024 Q8NFD4 153 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 OR51S1Q8NGJ8 323 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 URGCPQ8TCY9 931 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 MRPL53Q96EL3 112 aaKnown RBP0.36□□□□□ -2.35
CEP290-208ENST00000604024 SPATA13Q96N96 652 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 DDA1Q9BW61 102 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 BEX2Q9BXY8 128 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 EDEM3Q9BZQ6 932 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 CHCHD3Q9NX63 227 aaKnown RBP0.36□□□□□ -2.35
CEP290-208ENST00000604024 DUS2Q9NX74 493 aaKnown RBP0.36□□□□□ -2.35
CEP290-208ENST00000604024 SCML1Q9UN30 329 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 KLHDC2Q9Y2U9 406 aa0.36□□□□□ -2.35
CEP290-208ENST00000604024 ITPR2Q14571 2701 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms