RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 CD22P20273 847 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 ZNF10P21506 573 aaPredicted RBP3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 SERPINB1P30740 379 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 PCGF2P35227 344 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 PHBP35232 272 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 PTGER4P35408 488 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 HNF4AP41235 474 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 MAGEA12P43365 314 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 UQCRFS1P47985 274 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 TDGF1P3P51864 188 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 MTTPP55157 894 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 HSD17B7P56937 341 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 SLC26A5P58743 744 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 IRX1P78414 480 aaPredicted RBP3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 ARG2P78540 354 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 BIKQ13323 160 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 RAPSNQ13702 412 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 RCN2Q14257 317 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 SQLEQ14534 574 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 ABRAXAS2Q15018 415 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 TRADDQ15628 312 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 NSDHLQ15738 373 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 PDK4Q16654 411 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 DEFB134Q4QY38 66 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 PDLIM3Q53GG5 364 aaPredicted RBP3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 PRR30Q53SZ7 412 aaPredicted RBP3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 SFT2D3Q587I9 215 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 XKR6Q5GH73 641 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 SLC25A53Q5H9E4 307 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 PAGE2BQ5JRK9 111 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 C8orf74Q6P047 294 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 ZNF497Q6ZNH5 498 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 Q6ZSR9 355 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 LANCL3Q6ZV70 420 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 FRA10AC1Q70Z53 315 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 ANKRD37Q7Z713 158 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 PRSS58Q8IYP2 241 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 CENPLQ8N0S6 344 aaPredicted RBP3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 BCORP1Q8N888 145 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 MDS2Q8NDY4 140 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 MNS1Q8NEH6 495 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 NFAM1Q8NET5 270 aaPredicted RBP3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 OR2L5Q8NG80 312 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 OR5T3Q8NGG3 340 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 OR2T6Q8NHC8 308 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 SSC4DQ8WTU2 575 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 UBE2E3Q969T4 207 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 MS4A6EQ96DS6 147 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 C19orf60Q96EN9 201 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 MAGED4Q96JG8 741 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 LINC00479Q96M42 142 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 TSNARE1Q96NA8 513 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 SERINC2Q96SA4 455 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 FEVQ99581 238 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 EGFL8Q99944 293 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 TBCDQ9BTW9 1192 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 ROGDIQ9GZN7 287 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 AICDAQ9GZX7 198 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 CAB39LQ9H9S4 337 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 LYRM4Q9HD34 91 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 DNAJC11Q9NVH1 559 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 NKIRAS2Q9NYR9 191 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 STMN3Q9NZ72 180 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 NUDT4Q9NZJ9 180 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 MTRF1LQ9UGC7 380 aaKnown RBP3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 GRID1Q9ULK0 1009 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 ZNF490Q9ULM2 529 aaPredicted RBP3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 STUB1Q9UNE7 303 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 ACOT9Q9Y305 439 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 TMED3Q9Y3Q3 217 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 CELSR2Q9HCU4 2923 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 PCNX3Q9H6A9 2034 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 NUP214P35658 2090 aaPredicted RBP3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 CREBBPQ92793 2442 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 ABCA12Q86UK0 2595 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 IGKV3D-15A0A087WSY6 115 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 A0A1B0GUH1 482 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 CTAGE15A4D2H0 777 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 ZNF860A6NHJ4 632 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 SAGE2PA6NJ88 616 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 H0YIV9 168 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 PSMD12O00232 456 aaPredicted RBP3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 CLDN4O14493 209 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 ARHGEF9O43307 516 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 CTNSO60931 367 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 DNAJB6O75190 326 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 PIAS1O75925 651 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 KLHL2O95198 593 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 STATHP02808 62 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 SERPIND1P05546 499 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 C2P06681 752 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 ABHD2P08910 425 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 RBP1P09455 135 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 MC5RP33032 325 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 CLK1P49759 484 aaKnown RBP3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 SERPINB8P50452 374 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 SERPINB9P50453 376 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 ASCL1P50553 236 aa3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 LUMP51884 338 aaPredicted RBP3.09□□□□□ -1.91
CKS1BP3-201ENST00000600888 RAB38P57729 211 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms