RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 IGFBP5P24593 272 aa17.08■□□□□ 0.32
TNFRSF1B-204ENST00000536782 PPOXP50336 477 aa17.08■□□□□ 0.32
TNFRSF1B-204ENST00000536782 IQCCQ4KMZ1 466 aa17.08■□□□□ 0.32
TNFRSF1B-204ENST00000536782 FAM69AQ5T7M9 428 aa17.08■□□□□ 0.32
TNFRSF1B-204ENST00000536782 GOLGA6L1Q8N7Z2 621 aa17.08■□□□□ 0.32
TNFRSF1B-204ENST00000536782 LSMEM1Q8N8F7 131 aa17.08■□□□□ 0.32
TNFRSF1B-204ENST00000536782 ZNF540Q8NDQ6 660 aa17.08■□□□□ 0.32
TNFRSF1B-204ENST00000536782 SLC38A4Q969I6 547 aa17.08■□□□□ 0.32
TNFRSF1B-204ENST00000536782 TAAR8Q969N4 342 aa17.08■□□□□ 0.32
TNFRSF1B-204ENST00000536782 RAB1BQ9H0U4 201 aa17.08■□□□□ 0.32
TNFRSF1B-204ENST00000536782 CHODLQ9H9P2 273 aa17.08■□□□□ 0.32
TNFRSF1B-204ENST00000536782 SEC61A2Q9H9S3 476 aa17.08■□□□□ 0.32
TNFRSF1B-204ENST00000536782 GPR35Q9HC97 309 aa17.08■□□□□ 0.32
TNFRSF1B-204ENST00000536782 ANK2Q01484 3957 aa17.07■□□□□ 0.32
TNFRSF1B-204ENST00000536782 M0R082 166 aa17.07■□□□□ 0.32
TNFRSF1B-204ENST00000536782 AKAP8O43823 692 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1B-204ENST00000536782 SRD5A1P18405 259 aa17.07■□□□□ 0.32
TNFRSF1B-204ENST00000536782 PRKAR1BP31321 381 aa17.07■□□□□ 0.32
TNFRSF1B-204ENST00000536782 THBS2P35442 1172 aa17.07■□□□□ 0.32
TNFRSF1B-204ENST00000536782 IDH3GP51553 393 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF1B-204ENST00000536782 STX1BP61266 288 aa17.07■□□□□ 0.32
TNFRSF1B-204ENST00000536782 HDXQ7Z353 690 aa17.07■□□□□ 0.32
TNFRSF1B-204ENST00000536782 NET1Q7Z628 596 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF1B-204ENST00000536782 PIK3C3Q8NEB9 887 aa17.07■□□□□ 0.32
TNFRSF1B-204ENST00000536782 ZNF417Q8TAU3 575 aa17.07■□□□□ 0.32
TNFRSF1B-204ENST00000536782 DNAJA4Q8WW22 397 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF1B-204ENST00000536782 MSI2Q96DH6 328 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1B-204ENST00000536782 ZNF587Q96SQ5 575 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF1B-204ENST00000536782 ZNF442Q9H7R0 627 aa17.07■□□□□ 0.32
TNFRSF1B-204ENST00000536782 CRLF2Q9HC73 371 aa17.07■□□□□ 0.32
TNFRSF1B-204ENST00000536782 USH1CQ9Y6N9 552 aa17.07■□□□□ 0.32
TNFRSF1B-204ENST00000536782 IGHV4-61A0A0C4DH41 118 aa17.06■□□□□ 0.32
TNFRSF1B-204ENST00000536782 A0A1B0GWA3 101 aa17.06■□□□□ 0.32
TNFRSF1B-204ENST00000536782 SLC35F4A4IF30 521 aa17.06■□□□□ 0.32
TNFRSF1B-204ENST00000536782 CELA3BP08861 270 aa17.06■□□□□ 0.32
TNFRSF1B-204ENST00000536782 H2AFXP16104 143 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1B-204ENST00000536782 HOXB9P17482 250 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1B-204ENST00000536782 NPR2P20594 1047 aa17.06■□□□□ 0.32
TNFRSF1B-204ENST00000536782 GRPRP30550 384 aa17.06■□□□□ 0.32
TNFRSF1B-204ENST00000536782 THBS4P35443 961 aa17.06■□□□□ 0.32
TNFRSF1B-204ENST00000536782 ARR3P36575 388 aa17.06■□□□□ 0.32
TNFRSF1B-204ENST00000536782 IL1RL1Q01638 556 aa17.06■□□□□ 0.32
TNFRSF1B-204ENST00000536782 HGFACQ04756 655 aa17.06■□□□□ 0.32
TNFRSF1B-204ENST00000536782 CEACAM16Q2WEN9 425 aa17.06■□□□□ 0.32
TNFRSF1B-204ENST00000536782 ALG10BQ5I7T1 473 aa17.06■□□□□ 0.32
TNFRSF1B-204ENST00000536782 EPGNQ6UW88 154 aa17.06■□□□□ 0.32
TNFRSF1B-204ENST00000536782 H1FNTQ75WM6 255 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1B-204ENST00000536782 CCDC36Q8IYA8 594 aa17.06■□□□□ 0.32
TNFRSF1B-204ENST00000536782 VIPAS39Q9H9C1 493 aa17.06■□□□□ 0.32
TNFRSF1B-204ENST00000536782 TRAV36DV7A0A075B6V5 113 aa17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 LOC102725191A0A1B0GVB3 256 aa17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 hCG_2039718K7EN88 272 aa17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 ERCC1P07992 297 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 ARAFP10398 606 aa17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 ZNF23P17027 643 aa17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 HTR2AP28223 471 aa17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 CAPZA2P47755 286 aa17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 MRPL19P49406 292 aaKnown RBP17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 NPRL3Q12980 569 aa17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 FAM120AOSQ5T036 256 aa17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 GCNT6Q5T4J0 391 aa17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 ULK3Q6PHR2 472 aa17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 DHRS4L2Q6PKH6 230 aa17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 MYPOPQ86VE0 399 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 KRT73Q86Y46 540 aa17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 NFKBIDQ8NI38 313 aa17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 ZNF837Q96EG3 531 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 ATP6V1G3Q96LB4 118 aa17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 ANKRD27Q96NW4 1050 aa17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 OR2M2Q96R28 347 aa17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 SPATA5L1Q9BVQ7 753 aa17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 RSPO3Q9BXY4 272 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 BPESC1Q9GZL8 116 aa17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 SLC25A37Q9NYZ2 338 aa17.05■□□□□ 0.32
TNFRSF1B-204ENST00000536782 IGKV1D-42A0A075B6H8 117 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 IGHV2OR16-5A0A0B4J2B6 119 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 ZNF99A8MXY4 864 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 TGFAP01135 160 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 HNF1AP20823 631 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 CBLP22681 906 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 NCALDP61601 193 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 CDK6Q00534 326 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 MFSD13AQ14CX5 517 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 LRIF1Q5T3J3 769 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 FAM91A1Q658Y4 838 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 REEP3Q6NUK4 255 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 IL17RELQ6ZVW7 336 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 SPATA21Q7Z572 469 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 MDP1Q86V88 176 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 UEVLDQ8IX04 471 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 TMEM123Q8N131 208 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 SVOPLQ8N434 492 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 ADPRHL1Q8NDY3 354 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 IL17RDQ8NFM7 739 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 NEU4Q8WWR8 484 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 SLC47A1Q96FL8 570 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 DOK1Q99704 481 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 TCF7L2Q9NQB0 619 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 SELENONQ9NZV5 590 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 KLHL14Q9P2G3 628 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms