RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 MELKQ14680 651 aa11.33□□□□□ -0.6
VEGFA-224ENST00000523873 C9orf135Q5VTT2 229 aa11.33□□□□□ -0.6
VEGFA-224ENST00000523873 CARD17Q5XLA6 110 aa11.33□□□□□ -0.6
VEGFA-224ENST00000523873 STAC2Q6ZMT1 411 aa11.33□□□□□ -0.6
VEGFA-224ENST00000523873 CCDC121Q6ZUS5 278 aa11.33□□□□□ -0.6
VEGFA-224ENST00000523873 MBOAT2Q6ZWT7 520 aa11.33□□□□□ -0.6
VEGFA-224ENST00000523873 NANOGNBQ7Z5D8 188 aa11.33□□□□□ -0.6
VEGFA-224ENST00000523873 SPATA24Q86W54 205 aa11.33□□□□□ -0.6
VEGFA-224ENST00000523873 KIF18BQ86Y91 864 aa11.33□□□□□ -0.6
VEGFA-224ENST00000523873 ADGRG5Q8IZF4 528 aa11.33□□□□□ -0.6
VEGFA-224ENST00000523873 ZNF295-AS1Q8N0V1 137 aa11.33□□□□□ -0.6
VEGFA-224ENST00000523873 OR13C2Q8NGS9 318 aa11.33□□□□□ -0.6
VEGFA-224ENST00000523873 MOSPD2Q8NHP6 518 aa11.33□□□□□ -0.6
VEGFA-224ENST00000523873 BPIFA2Q96DR5 249 aa11.33□□□□□ -0.6
VEGFA-224ENST00000523873 ZC3HAV1LQ96H79 300 aaKnown RBP11.33□□□□□ -0.6
VEGFA-224ENST00000523873 FAM46AQ96IP4 442 aaKnown RBP11.33□□□□□ -0.6
VEGFA-224ENST00000523873 DHRS1Q96LJ7 313 aa11.33□□□□□ -0.6
VEGFA-224ENST00000523873 TRIM15Q9C019 465 aa11.33□□□□□ -0.6
VEGFA-224ENST00000523873 SLC7A10Q9NS82 523 aa11.33□□□□□ -0.6
VEGFA-224ENST00000523873 HEATR1Q9H583 2144 aaKnown RBP11.33□□□□□ -0.6
VEGFA-224ENST00000523873 UTP20O75691 2785 aaKnown RBP11.33□□□□□ -0.6
VEGFA-224ENST00000523873 A0A1W2PRQ8 180 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 TUBAL3A6NHL2 446 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 EFCAB9A8MZ26 197 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 C16orf97H3BN30 126 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 BLOC1S5-TXNDC5H3BN57 136 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 EBAG9O00559 213 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 HNRNPRO43390 633 aaKnown RBP11.32□□□□□ -0.6
VEGFA-224ENST00000523873 UPK3AO75631 287 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 OR6A2O95222 327 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 GADD45GO95257 159 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 HIST1H2ABP04908 130 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 F13BP05160 661 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 AQP2P41181 271 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 SORDQ00796 357 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 CHRNB3Q05901 458 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 RPL18Q07020 188 aaKnown RBP11.32□□□□□ -0.6
VEGFA-224ENST00000523873 DGCR6Q14129 220 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 FBXW9Q5XUX1 488 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 NHLRC1Q6VVB1 395 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 ASRGL1Q7L266 308 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 HIST3H2AQ7L7L0 130 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 LINGO2Q7L985 606 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 PIWIL3Q7Z3Z3 882 aaKnown RBP11.32□□□□□ -0.6
VEGFA-224ENST00000523873 CANT1Q8WVQ1 401 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 HIST1H2ACQ93077 130 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 WFIKKN1Q96NZ8 548 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 ALKBH3Q96Q83 286 aaPredicted RBP11.32□□□□□ -0.6
VEGFA-224ENST00000523873 FUZQ9BT04 418 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 ANKRD19PQ9H560 264 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 MAGIXQ9H6Y5 334 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 VNN3Q9NY84 501 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 UPB1Q9UBR1 384 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 NBPF19A0A087WUL8 3843 aa11.32□□□□□ -0.6
VEGFA-224ENST00000523873 TRAV27A0A087WT01 109 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 SH3D21A4FU49 640 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 SLC35F4A4IF30 521 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 AQP12BA6NM10 295 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 CDC42EP2O14613 210 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 RNF13O43567 381 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 IGF2P01344 180 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 SAGP10523 405 aaPredicted RBP11.31□□□□□ -0.6
VEGFA-224ENST00000523873 IFNGR1P15260 489 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 DNAJA1P31689 397 aaKnown RBP11.31□□□□□ -0.6
VEGFA-224ENST00000523873 MAGEA2P43356 314 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 ZP4Q12836 540 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 CAMK2DQ13557 499 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 LAPTM4AQ15012 233 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 FAM98BQ52LJ0 330 aaKnown RBP11.31□□□□□ -0.6
VEGFA-224ENST00000523873 PHYHD1Q5SRE7 291 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 SFRP5Q5T4F7 317 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 ALKBH2Q6NS38 261 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 Q6ZT83 130 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 RRM2BQ7LG56 351 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 BHLHA15Q7RTS1 189 aaPredicted RBP11.31□□□□□ -0.6
VEGFA-224ENST00000523873 IGFN1Q86VF2 1251 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 AQP12AQ8IXF9 295 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 RNF113BQ8IZP6 322 aaKnown RBP11.31□□□□□ -0.6
VEGFA-224ENST00000523873 OR4K5Q8NGD3 323 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 OR51A7Q8NH64 312 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 UTP4Q969X6 686 aaKnown RBP11.31□□□□□ -0.6
VEGFA-224ENST00000523873 S100PBPQ96BU1 408 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 OR2M2Q96R28 347 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 ZNF347Q96SE7 839 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 ACTR6Q9GZN1 396 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 SLCO5A1Q9H2Y9 848 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 PARPBPQ9NWS1 579 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 NOX1Q9Y5S8 564 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 HECTD1Q9ULT8 2610 aa11.31□□□□□ -0.6
VEGFA-224ENST00000523873 LOC102725191A0A1B0GVB3 256 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 TCRBV3S1A0A5B6 114 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 DHRS12A0PJE2 317 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 SH3PXD2BA1X283 911 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 TNFRSF11BO00300 401 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 RAD51DO75771 328 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 ZNF432O94892 652 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 THBDP07204 575 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 ITGA5P08648 1049 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 PSMB1P20618 241 aaKnown RBP11.3□□□□□ -0.6
VEGFA-224ENST00000523873 COX5AP20674 150 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms