RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 SLPIP03973 132 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 CSTBP04080 98 aaKnown RBP4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 THRBP10828 461 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 CD1DP15813 335 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 ZNF37AP17032 561 aaPredicted RBP4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 DRD4P21917 467 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 CTNNA2P26232 953 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 GSTM2P28161 218 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 SFTPDP35247 375 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 CDKN2BP42772 138 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 HMGA2P52926 109 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 HOXA4Q00056 320 aaPredicted RBP4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 COX10Q12887 443 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 HNRNPA0Q13151 305 aaKnown RBP4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 PRPSAP1Q14558 356 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 EXOSC7Q15024 291 aaKnown RBP4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 PDK3Q15120 406 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 PRICKLE4Q2TBC4 344 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 C9orf135Q5VTT2 229 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 ITPRIPL1Q6GPH6 555 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 ZNF774Q6NX45 483 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 C6orf89Q6UWU4 347 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 NPSR1Q6W5P4 371 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 MARCH3Q86UD3 253 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 CALHM3Q86XJ0 350 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 RFX6Q8HWS3 928 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 OR4N2Q8NGD1 307 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 RAB40AQ8WXH6 277 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 PEX13Q92968 403 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 APH1AQ96BI3 265 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 DAZAP1Q96EP5 407 aaKnown RBP4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 TIMD4Q96H15 378 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 KCNS3Q9BQ31 491 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 SORBS1Q9BX66 1292 aaKnown RBP4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 DPAGT1Q9H3H5 408 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 SDHAF3Q9NRP4 125 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 MED17Q9NVC6 651 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 MS4A12Q9NXJ0 267 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 CRYL1Q9Y2S2 319 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 PLLPQ9Y342 182 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 LRP1Q07954 4544 aaKnown RBP4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 AP4M1O00189 453 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 NR5A2O00482 541 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 SPRY2O43597 315 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 CST8O60676 142 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 METTL18O95568 372 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 WNT2P09544 360 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 LINGO3P0C6S8 592 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 FRMD6-AS1P0C7T7 363 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 CCDC172P0C7W6 258 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 C1GALT1C1LP0DN25 315 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 MMP9P14780 707 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 PAX7P23759 505 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 MPGP29372 298 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 GLRXP35754 106 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 GP5P40197 560 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 GSTM5P46439 218 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 ALDH18A1P54886 795 aaKnown RBP4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 TXNL4AP83876 142 aaKnown RBP4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 TGFBR3Q03167 851 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 ZNF155Q12901 538 aaPredicted RBP4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 STX5Q13190 355 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 PFKFB4Q16877 469 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 TMEM176BQ3YBM2 270 aaPredicted RBP4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 ATPAF1Q5TC12 328 aaPredicted RBP4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 SUMO4Q6EEV6 95 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 APTXQ7Z2E3 356 aaKnown RBP4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 LRRC28Q86X40 367 aaPredicted RBP4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 VPS37AQ8NEZ2 397 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 WDR20Q8TBZ3 569 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 CD200R1Q8TD46 325 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 BCL2L2Q92843 193 aaPredicted RBP4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 EFHD2Q96C19 240 aaPredicted RBP4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 ZNF524Q96C55 264 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 FBXL8Q96CD0 374 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 FYTTD1Q96QD9 318 aaKnown RBP4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 PRPF18Q99633 342 aaKnown RBP4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 RBBP8Q99708 897 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 ROGDIQ9GZN7 287 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 PPA2Q9H2U2 334 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 EHD1Q9H4M9 534 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 COPS7BQ9H9Q2 264 aaPredicted RBP4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 NOX3Q9HBY0 568 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 TREX1Q9NSU2 369 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 INTS10Q9NVR2 710 aaKnown RBP4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 CFL2Q9Y281 166 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 SMAD5-AS1Q9Y6J3 95 aa4.23□□□□□ -1.73
SBDSP1-204ENST00000453858 DSPPQ9NZW4 1301 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 ARPC4-TTLL3A0A0A6YYG9 625 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 GOLGA8KD6RF30 607 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 GOLGA8TH3BQL2 631 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 OPN1SWP03999 348 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 C8GP07360 202 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 HNRNPCP07910 306 aaKnown RBP eCLIP4.22□□□□□ -1.738e-8■■■■□ 23.8
SBDSP1-204ENST00000453858 RBMY1CP0DJD4 496 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 ZNF35P13682 527 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 ZNF14P17017 642 aaPredicted RBP4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 MATN1P21941 496 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 UQCRC2P22695 453 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms