RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 ASPMQ8IZT6 3477 aa19.88■□□□□ 0.77
VSX1-205ENST00000429762 ANKRD33BA6NCL7 494 aa19.88■□□□□ 0.77
VSX1-205ENST00000429762 LIPT2A6NK58 231 aa19.88■□□□□ 0.77
VSX1-205ENST00000429762 IDH3BO43837 385 aa19.88■□□□□ 0.77
VSX1-205ENST00000429762 ZIC3O60481 467 aa19.88■□□□□ 0.77
VSX1-205ENST00000429762 AKR7A3O95154 331 aa19.88■□□□□ 0.77
VSX1-205ENST00000429762 WDPCPO95876 746 aa19.88■□□□□ 0.77
VSX1-205ENST00000429762 RFPL3SP0C7P2 107 aa19.88■□□□□ 0.77
VSX1-205ENST00000429762 GTF2E2P29084 291 aaKnown RBP19.88■□□□□ 0.77
VSX1-205ENST00000429762 PYCR1P32322 319 aa19.88■□□□□ 0.77
VSX1-205ENST00000429762 TGFBR1P36897 503 aa19.88■□□□□ 0.77
VSX1-205ENST00000429762 DSCR4P56555 118 aaPredicted RBP19.88■□□□□ 0.77
VSX1-205ENST00000429762 MELKQ14680 651 aa19.88■□□□□ 0.77
VSX1-205ENST00000429762 ANKDD1AQ495B1 522 aa19.88■□□□□ 0.77
VSX1-205ENST00000429762 P2RY8Q86VZ1 359 aa19.88■□□□□ 0.77
VSX1-205ENST00000429762 MFSD8Q8NHS3 518 aa19.88■□□□□ 0.77
VSX1-205ENST00000429762 TSC22D3Q99576 134 aa19.88■□□□□ 0.77
VSX1-205ENST00000429762 MRPL39Q9NYK5 338 aaKnown RBP19.88■□□□□ 0.77
VSX1-205ENST00000429762 DCDC2BA2VCK2 349 aa19.87■□□□□ 0.77
VSX1-205ENST00000429762 LRRC3CA6NJW4 275 aa19.87■□□□□ 0.77
VSX1-205ENST00000429762 SLC22A31A6NKX4 558 aa19.87■□□□□ 0.77
VSX1-205ENST00000429762 FREM3P0C091 2139 aa19.87■□□□□ 0.77
VSX1-205ENST00000429762 SPI1P17947 270 aa19.87■□□□□ 0.77
VSX1-205ENST00000429762 SPHARQ15513 63 aa19.87■□□□□ 0.77
VSX1-205ENST00000429762 ACKR1Q16570 336 aa19.87■□□□□ 0.77
VSX1-205ENST00000429762 CTF1Q16619 201 aa19.87■□□□□ 0.77
VSX1-205ENST00000429762 TMEM176BQ3YBM2 270 aaPredicted RBP19.87■□□□□ 0.77
VSX1-205ENST00000429762 GATAD2BQ8WXI9 593 aa19.87■□□□□ 0.77
VSX1-205ENST00000429762 SMPDL3BQ92485 455 aa19.87■□□□□ 0.77
VSX1-205ENST00000429762 ZBTB8AQ96BR9 441 aa19.87■□□□□ 0.77
VSX1-205ENST00000429762 ADGRL4Q9HBW9 690 aa19.87■□□□□ 0.77
VSX1-205ENST00000429762 PTTG2Q9NZH5 202 aa19.87■□□□□ 0.77
VSX1-205ENST00000429762 EXOSC1Q9Y3B2 195 aaKnown RBP19.87■□□□□ 0.77
VSX1-205ENST00000429762 PTPRZ1P23471 2315 aaPredicted RBP19.87■□□□□ 0.77
VSX1-205ENST00000429762 MS4A18H0YCH9 400 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 NEURL1O76050 574 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 GADD45AP24522 165 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 RFC3P40938 356 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 HCCSP53701 268 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 MS4A18Q3C1V0 323 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 RNLSQ5VYX0 342 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 IGF2-ASQ6U949 168 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 YRDCQ86U90 279 aaKnown RBP19.86■□□□□ 0.77
VSX1-205ENST00000429762 GTPBP8Q8N3Z3 284 aaPredicted RBP19.86■□□□□ 0.77
VSX1-205ENST00000429762 GALNT16Q8N428 558 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 PROKR2Q8NFJ6 384 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 OR10H4Q8NGA5 316 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 RAB2BQ8WUD1 216 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 UTP23Q9BRU9 249 aaKnown RBP19.86■□□□□ 0.77
VSX1-205ENST00000429762 POTEKPQ9BYX7 375 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 TTTY10Q9BZA0 68 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 NDEL1Q9GZM8 345 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 CHCHD3Q9NX63 227 aaKnown RBP19.86■□□□□ 0.77
VSX1-205ENST00000429762 A0A087WZY1 265 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 C12orf71A8MTZ7 269 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 J3QRE1 110 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 ZNF701M0R085 212 aaPredicted RBP19.86■□□□□ 0.77
VSX1-205ENST00000429762 ARHGEF9O43307 516 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 TXNDC12O95881 172 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 IGHA1P01876 353 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 APEHP13798 732 aaKnown RBP19.86■□□□□ 0.77
VSX1-205ENST00000429762 KLK2P20151 261 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 PAX7P23759 505 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 NAA10P41227 235 aaPredicted RBP19.86■□□□□ 0.77
VSX1-205ENST00000429762 EIF1P41567 113 aaKnown RBP19.86■□□□□ 0.77
VSX1-205ENST00000429762 SELENBP1Q13228 472 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 SPCS2Q15005 226 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 GPALPP1Q8IXQ4 340 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 OR6K6Q8NGW6 343 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 C5orf34Q96MH7 638 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 ZNF649Q9BS31 505 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 NMNAT2Q9BZQ4 307 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 ERVK13-1Q9NX77 482 aa19.86■□□□□ 0.77
VSX1-205ENST00000429762 CNTRLQ7Z7A1 2325 aa19.85■□□□□ 0.77
VSX1-205ENST00000429762 PNMA8CA0A1B0GUJ8 204 aa19.85■□□□□ 0.77
VSX1-205ENST00000429762 OR2M5A3KFT3 312 aa19.85■□□□□ 0.77
VSX1-205ENST00000429762 CBR3O75828 277 aa19.85■□□□□ 0.77
VSX1-205ENST00000429762 GABARAPO95166 117 aa19.85■□□□□ 0.77
VSX1-205ENST00000429762 ACVR1BP36896 505 aa19.85■□□□□ 0.77
VSX1-205ENST00000429762 CASRP41180 1078 aa19.85■□□□□ 0.77
VSX1-205ENST00000429762 RGS6P49758 472 aa19.85■□□□□ 0.77
VSX1-205ENST00000429762 OR2B6P58173 313 aa19.85■□□□□ 0.77
VSX1-205ENST00000429762 OR1C1Q15619 314 aa19.85■□□□□ 0.77
VSX1-205ENST00000429762 SSX1Q16384 188 aa19.85■□□□□ 0.77
VSX1-205ENST00000429762 WDFY1Q8IWB7 410 aa19.85■□□□□ 0.77
VSX1-205ENST00000429762 OR6S1Q8NH40 331 aa19.85■□□□□ 0.77
VSX1-205ENST00000429762 RERGLQ9H628 205 aa19.85■□□□□ 0.77
VSX1-205ENST00000429762 SRA1Q9HD15 236 aaKnown RBP19.85■□□□□ 0.77
VSX1-205ENST00000429762 CHST11Q9NPF2 352 aa19.85■□□□□ 0.77
VSX1-205ENST00000429762 TIMMDC1Q9NPL8 285 aa19.85■□□□□ 0.77
VSX1-205ENST00000429762 ABI3Q9P2A4 366 aa19.85■□□□□ 0.77
VSX1-205ENST00000429762 DCTN6O00399 190 aa19.84■□□□□ 0.77
VSX1-205ENST00000429762 VBP1P61758 197 aa19.84■□□□□ 0.77
VSX1-205ENST00000429762 TLE3Q04726 772 aa19.84■□□□□ 0.77
VSX1-205ENST00000429762 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.84■□□□□ 0.77
VSX1-205ENST00000429762 SOWAHCQ53LP3 525 aaPredicted RBP19.84■□□□□ 0.77
VSX1-205ENST00000429762 H1FNTQ75WM6 255 aaPredicted RBP19.84■□□□□ 0.77
VSX1-205ENST00000429762 RFLNBQ8N5W9 214 aa19.84■□□□□ 0.77
VSX1-205ENST00000429762 OR51E2Q9H255 320 aa19.84■□□□□ 0.77
VSX1-205ENST00000429762 ALKBH4Q9NXW9 302 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms