RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 EPYCQ99645 322 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 EMC6Q9BV81 110 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 LINC00470Q9BZP3 86 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 CRLF2Q9HC73 371 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 GPR35Q9HC97 309 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 OBP2BQ9NPH6 170 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 KLHL14Q9P2G3 628 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 C2CD3Q4AC94 2353 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 A0A087WUJ7 227 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 LRRN3E7EW58 273 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 C11orf98E9PRG8 122 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 AKAP8O43823 692 aaKnown RBP8.1□□□□□ -1.11
NUP50-206ENST00000422489 OR6A2O95222 327 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 HLA-DOBP13765 273 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 H2AFXP16104 143 aaPredicted RBP8.1□□□□□ -1.11
NUP50-206ENST00000422489 ARFIP2P53365 341 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 POU3F1Q03052 451 aaPredicted RBP8.1□□□□□ -1.11
NUP50-206ENST00000422489 MFSD13AQ14CX5 517 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 MMEL1Q495T6 779 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 METTL21CQ5VZV1 264 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 C11orf71Q6IPW1 123 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 TTC33Q6PID6 262 aaPredicted RBP8.1□□□□□ -1.11
NUP50-206ENST00000422489 PATL1Q86TB9 770 aaKnown RBP8.1□□□□□ -1.11
NUP50-206ENST00000422489 PTOV1Q86YD1 416 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 RBM45Q8IUH3 476 aaKnown RBP8.1□□□□□ -1.11
NUP50-206ENST00000422489 DPP10Q8N608 796 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 OR2M2Q96R28 347 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 VRK1Q99986 396 aaPredicted RBP8.1□□□□□ -1.11
NUP50-206ENST00000422489 TMEM120AQ9BXJ8 343 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 EVA1AQ9H8M9 152 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 RCE1Q9Y256 329 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 POFUT2Q9Y2G5 429 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 CORINQ9Y5Q5 1042 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 GMEB1Q9Y692 573 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 ACANP16112 2415 aa8.1□□□□□ -1.11
NUP50-206ENST00000422489 NIPBLQ6KC79 2804 aaeCLIP8.09□□□□□ -1.11
NUP50-206ENST00000422489 FLNAP21333 2647 aaKnown RBP8.09□□□□□ -1.11
NUP50-206ENST00000422489 IGHV4-30-2A0A087WSY4 118 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 ARPC4-TTLL3A0A0A6YYG9 625 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 A0A0B4J2E0 115 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 LOC100653049A0A140TA62 436 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 A0A1B0GX12 115 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 SLC35F4A4IF30 521 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 VSTM5A8MXK1 200 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 GPRIN2O60269 458 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 SASH3O75995 380 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 KRT34O76011 436 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 SEC14L2O76054 403 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 LY6HO94772 140 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 ZNF432O94892 652 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 HPRP00739 348 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 BGLAPP02818 100 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 HIST1H2ABP04908 130 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 VIMP08670 466 aaKnown RBP8.09□□□□□ -1.11
NUP50-206ENST00000422489 TROVE2P10155 538 aaKnown RBP eCLIP8.09□□□□□ -1.11
NUP50-206ENST00000422489 CD79AP11912 226 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 CBR1P16152 277 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 SERPINF1P36955 418 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 EFNA4P52798 201 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 SH3BGRP55822 239 aaPredicted RBP8.09□□□□□ -1.11
NUP50-206ENST00000422489 DSCR9P59020 149 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 PIGFQ07326 219 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 NPRL3Q12980 569 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 CAMK2DQ13557 499 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 CYLC2Q14093 348 aaPredicted RBP8.09□□□□□ -1.11
NUP50-206ENST00000422489 CARTPTQ16568 116 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 MST1LQ2TV78 715 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 ENTPD8Q5MY95 495 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 PHYHD1Q5SRE7 291 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 C1QTNF12Q5T7M4 302 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 NANOGP8Q6NSW7 305 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 HIST3H2AQ7L7L0 130 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 SLC30A8Q8IWU4 369 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 ZNF525Q8N782 197 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 GPR32P1Q8NGA4 272 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 OR6T1Q8NGN1 323 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 OR6N1Q8NGY5 312 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 OR6S1Q8NH40 331 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 MAGEE2Q8TD90 523 aaPredicted RBP8.09□□□□□ -1.11
NUP50-206ENST00000422489 TSPEARQ8WU66 669 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 HIST1H2ACQ93077 130 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 ZNF837Q96EG3 531 aaPredicted RBP8.09□□□□□ -1.11
NUP50-206ENST00000422489 MOGAT1Q96PD6 335 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 ARHGDIGQ99819 225 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 ECSITQ9BQ95 431 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 SIKE1Q9BRV8 207 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 ZNF385DQ9H6B1 395 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 KAT8Q9H7Z6 458 aaKnown RBP8.09□□□□□ -1.11
NUP50-206ENST00000422489 NANOGQ9H9S0 305 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 B3GAT2Q9NPZ5 323 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 MED29Q9NX70 200 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 B3GAT1Q9P2W7 334 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 NOX1Q9Y5S8 564 aa8.09□□□□□ -1.11
NUP50-206ENST00000422489 LOC102725191A0A1B0GVB3 256 aa8.08□□□□□ -1.12
NUP50-206ENST00000422489 KIAA1324LA8MWY0 1029 aaPredicted RBP8.08□□□□□ -1.12
NUP50-206ENST00000422489 RPL36A-HNRNPH2H7BZ11 118 aa8.08□□□□□ -1.12
NUP50-206ENST00000422489 H7C417 338 aa8.08□□□□□ -1.12
NUP50-206ENST00000422489 KPNA4O00629 521 aaPredicted RBP8.08□□□□□ -1.12
NUP50-206ENST00000422489 FBP2O00757 339 aa8.08□□□□□ -1.12
NUP50-206ENST00000422489 PLPP3O14495 311 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms