RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 PMP22Q01453 160 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 CATR1Q13166 79 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 DUSP8Q13202 625 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 NKG7Q16617 165 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 RGS21Q2M5E4 152 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 ATP1A1-AS1Q5TC04 95 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 XKRXQ6PP77 449 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 H1FNTQ75WM6 255 aaPredicted RBP8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 PDZD9Q8IXQ8 264 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 NAT8LQ8N9F0 302 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 POLR2J2Q9GZM3 115 aaKnown RBP8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 SAP30LQ9HAJ7 183 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 CISD1Q9NZ45 108 aaKnown RBP8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 POLDIP2Q9Y2S7 368 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 RNF212BA8MTL3 300 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 ADH4P08319 380 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 CPEP16870 476 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 RELBQ01201 579 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 SPATA46Q5T0L3 261 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 C1orf140Q5VVS0 124 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 PHTF2Q8N3S3 785 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 LSM14AQ8ND56 463 aaKnown RBP8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 OR5K1Q8NHB7 308 aa8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 AMMECR1Q9Y4X0 333 aaPredicted RBP8.44□□□□□ -1.06
LIMCH1-202ENST00000381753 CEBPZOSA8MTT3 80 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 DEGS1O15121 323 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 OR7C1O76099 320 aaPredicted RBP8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 CT45A6P0DMU7 189 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 CT45A5P0DMU8 189 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 CT45A7P0DMV0 189 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 CT45A8P0DMV1 189 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 CT45A9P0DMV2 189 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 RAP2AP10114 183 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 SERPINA2P20848 420 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 MAP2K4P45985 399 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 CT45A2Q5DJT8 189 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 CT45A1Q5HYN5 189 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 CPZQ66K79 652 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 C16orf47Q6ZP98 133 aaPredicted RBP8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 MEPCEQ7L2J0 689 aaKnown RBP8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 CT45A3Q8NHU0 189 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 SAP25Q8TEE9 199 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 CCDC107Q8WV48 283 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 PECRQ9BY49 303 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 METTL9Q9H1A3 318 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 ZNF768Q9H5H4 540 aaKnown RBP8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 SLC39A9Q9NUM3 307 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 TMEM74BQ9NUR3 256 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 GSKIPQ9P0R6 139 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 B3GALT5Q9Y2C3 310 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 SLC22A31A6NKX4 558 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 ITGAMP11215 1152 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 ZNF182P17025 639 aaPredicted RBP8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 MTCP1P56278 107 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 ARL6IP1Q15041 203 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 NTRK2Q16620 822 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 CPNE8Q86YQ8 564 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 LACC1Q8IV20 430 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 FADS6Q8N9I5 356 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 OR51L1Q8NGJ5 315 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 ADAMTS14Q8WXS8 1223 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 TTC9Q92623 222 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 WWTR1Q9GZV5 400 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 RHBDD3Q9Y3P4 386 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 BAZ2AQ9UIF9 1905 aaKnown RBP8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 TMEM233B4DJY2 109 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 PSMG1O95456 288 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 TGFAP01135 160 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 ETS2P15036 469 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 GPX6P59796 221 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 OR4D1Q15615 310 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 GUCA2BQ16661 112 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 PLET1Q6UQ28 207 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 ESPNLQ6ZVH7 1005 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 C15orf40Q8WUR7 153 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 DIRAS2Q96HU8 199 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 SLC45A3Q96JT2 553 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 FAM210AQ96ND0 272 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 OR2A14Q96R47 310 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 VN1R1Q9GZP7 353 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 PNPLA3Q9NST1 481 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 SLC22A7Q9Y694 548 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 MPIG6BO95866 241 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 B3GALT4O96024 378 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 MAS1P04201 325 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 ANXA7P20073 488 aaKnown RBP8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 HNRNPH3P31942 346 aaKnown RBP8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 RGS19P49795 217 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 ROR2Q01974 943 aaKnown RBP8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 CBLBQ13191 982 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 CA13Q8N1Q1 262 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 SPERTQ8NA61 448 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 OR5D14Q8NGL3 314 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 OR4A16Q8NH70 328 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 CASTOR1Q8WTX7 329 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 MIB2Q96AX9 1013 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 MRPS24Q96EL2 167 aaKnown RBP8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 LMF1Q96S06 567 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 C7orf50Q9BRJ6 194 aaKnown RBP8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 DPAGT1Q9H3H5 408 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms