RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 TLX3O43711 291 aaPredicted RBP11.55□□□□□ -0.56
DDX39A-202ENST00000324340 PDGFAP04085 211 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 LCKP06239 509 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 GP1BBP13224 206 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 SPINK2P20155 84 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 MYL9P24844 172 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 EPHA2P29317 976 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 TACR3P29371 465 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 CRISP1P54107 249 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 IL1RL1Q01638 556 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 Q5BKY6 102 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 SLC25A53Q5H9E4 307 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 FAM205BPQ63HN1 556 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 GRINAQ7Z429 371 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 P3H2Q8IVL5 708 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 DEPDC4Q8N2C3 294 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 CLDN22Q8N7P3 220 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 OR2M3Q8NG83 312 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 PFN4Q8NHR9 129 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 KCNE4Q8WWG9 221 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 BPIFA2Q96DR5 249 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 FAM46AQ96IP4 442 aaKnown RBP11.55□□□□□ -0.56
DDX39A-202ENST00000324340 TTYH2Q9BSA4 534 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 RNF121Q9H920 327 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 SMURF1Q9HCE7 757 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 C20orf141Q9NUB4 165 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 TAS2R10Q9NYW0 307 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 GLTPQ9NZD2 209 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 MED11Q9P086 117 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 DKK4Q9UBT3 224 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 POLHQ9Y253 713 aa11.55□□□□□ -0.56
DDX39A-202ENST00000324340 A0A0X1KG70 313 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 ELOA3DA6NLF2 546 aaPredicted RBP11.54□□□□□ -0.56
DDX39A-202ENST00000324340 EFSO43281 561 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 WBP4O75554 376 aaKnown RBP11.54□□□□□ -0.56
DDX39A-202ENST00000324340 SNAPC5O75971 98 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 OR7A10O76100 309 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 NUDT14O95848 222 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 IFI30P13284 250 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 TNFSF8P32971 234 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 CD96P40200 585 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 RGS6P49758 472 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 POLR2HP52434 150 aaKnown RBP11.54□□□□□ -0.56
DDX39A-202ENST00000324340 FOXK2Q01167 660 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 ELOA3BQ3SY89 546 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 SLC35F1Q5T1Q4 408 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 PRAMEF20Q5VT98 475 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 OR5M10Q6IEU7 315 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 TMPRSS11AQ6ZMR5 421 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 RASSF6Q6ZTQ3 369 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 MDGA2Q7Z553 956 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 OR8H2Q8N162 312 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 ELOA3Q8NG57 546 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 CDCA4Q9BXL8 241 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 RNF32Q9H0A6 362 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.54□□□□□ -0.564e-7■□□□□ 10.9
DDX39A-202ENST00000324340 CNOT2Q9NZN8 540 aaKnown RBP11.54□□□□□ -0.56
DDX39A-202ENST00000324340 ZMAT5Q9UDW3 170 aaKnown RBP11.54□□□□□ -0.56
DDX39A-202ENST00000324340 SPTBN4Q9H254 2564 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 SH3D21A4FU49 640 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 ZAR1LA6NP61 321 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 TRIM77I1YAP6 450 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 CDC42EP2O14613 210 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 HCN1O60741 890 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 NEURL1O76050 574 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 P04436 131 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 PRKAR1AP10644 381 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 MAKP20794 623 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 GGT2P36268 569 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 CASRP41180 1078 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 GPR4P46093 362 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 MAP2K6P52564 334 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 EGR4Q05215 589 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 MFAP5Q13361 173 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 PTGES3Q15185 160 aaKnown RBP11.54□□□□□ -0.56
DDX39A-202ENST00000324340 INPP5JQ15735 1006 aaPredicted RBP11.54□□□□□ -0.56
DDX39A-202ENST00000324340 TAB1Q15750 504 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 PLPPR5Q32ZL2 321 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 ZBTB37Q5TC79 503 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 ARSKQ6UWY0 536 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 ADGRG3Q86Y34 549 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 KIF18BQ86Y91 864 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 CDK20Q8IZL9 346 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 STX19Q8N4C7 294 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 LIPHQ8WWY8 451 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 C1GALT1C1Q96EU7 318 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 MRGPRX4Q96LA9 322 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 CITED4Q96RK1 184 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 UTP23Q9BRU9 249 aaKnown RBP11.54□□□□□ -0.56
DDX39A-202ENST00000324340 SRRQ9GZT4 340 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 PTGES2Q9H7Z7 377 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 RANGRFQ9HD47 186 aaPredicted RBP11.54□□□□□ -0.56
DDX39A-202ENST00000324340 PLSCR3Q9NRY6 295 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 MED17Q9NVC6 651 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 ANKRD10Q9NXR5 420 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 LRFN1Q9P244 771 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 FBXL2Q9UKC9 423 aa11.54□□□□□ -0.56
DDX39A-202ENST00000324340 PCNX3Q9H6A9 2034 aa11.53□□□□□ -0.56
DDX39A-202ENST00000324340 A0A087WZY1 265 aa11.53□□□□□ -0.56
DDX39A-202ENST00000324340 TMED7-TICAM2A0A0A6YYA0 188 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms