RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 FAM120AOSQ5T036 256 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 MYPOPQ86VE0 399 aaPredicted RBP11.92□□□□□ -0.5
HDAC5-208ENST00000588419 EPHX4Q8IUS5 362 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 GPR137CQ8N3F9 429 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 OR9I1Q8NGQ6 314 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 VPS33AQ96AX1 596 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 MSI2Q96DH6 328 aaKnown RBP11.92□□□□□ -0.5
HDAC5-208ENST00000588419 SPATA9Q9BWV2 254 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 DYNLRB1Q9NP97 96 aa11.92□□□□□ -0.5
HDAC5-208ENST00000588419 A0A096LPI6 279 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 LRP5LA4QPB2 252 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 VWC2LB2RUY7 222 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 TMEM229AB2RXF0 380 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 B9A039 149 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 C5orf58C9J3I9 102 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 hCG_2039718K7EN88 272 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 NDUFS8O00217 210 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 SLC43A1O75387 559 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 VAMP5O95183 116 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 TGFAP01135 160 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 NUDT7P0C024 238 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 MVDP53602 400 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 ARF1P84077 181 aaKnown RBP11.91□□□□□ -0.5
HDAC5-208ENST00000588419 CARD17Q5XLA6 110 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 ANKRD16Q6P6B7 361 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 SPATA21Q7Z572 469 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 SVOPLQ8N434 492 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 BCL2L2Q92843 193 aaPredicted RBP11.91□□□□□ -0.5
HDAC5-208ENST00000588419 MAL2Q969L2 176 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 KTI12Q96EK9 354 aaPredicted RBP11.91□□□□□ -0.5
HDAC5-208ENST00000588419 ITCHQ96J02 903 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 C19orf24Q9BVV8 132 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 PARD6BQ9BYG5 372 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 RAB1BQ9H0U4 201 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 NELFAQ9H3P2 528 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 THAP1Q9NVV9 213 aa11.91□□□□□ -0.5
HDAC5-208ENST00000588419 ARPC4-TTLL3A0A0A6YYG9 625 aa11.9□□□□□ -0.5
HDAC5-208ENST00000588419 A0A0G2JPF8 293 aa11.9□□□□□ -0.5
HDAC5-208ENST00000588419 LOC390937A0A1W2PQ73 354 aa11.9□□□□□ -0.5
HDAC5-208ENST00000588419 TMEM120BA0PK00 339 aa11.9□□□□□ -0.5
HDAC5-208ENST00000588419 OR6C65A6NJZ3 312 aa11.9□□□□□ -0.5
HDAC5-208ENST00000588419 HNRNPCL2B2RXH8 293 aa11.9□□□□□ -0.5
HDAC5-208ENST00000588419 HNRNPCL3B7ZW38 293 aa11.9□□□□□ -0.5
HDAC5-208ENST00000588419 HNRNPCL1O60812 293 aaKnown RBP11.9□□□□□ -0.5
HDAC5-208ENST00000588419 ERCC1P07992 297 aaPredicted RBP11.9□□□□□ -0.5
HDAC5-208ENST00000588419 HNRNPCL4P0DMR1 293 aa11.9□□□□□ -0.5
HDAC5-208ENST00000588419 THBS4P35443 961 aa11.9□□□□□ -0.5
HDAC5-208ENST00000588419 POLR2JP52435 117 aaKnown RBP11.9□□□□□ -0.5
HDAC5-208ENST00000588419 CEACAM16Q2WEN9 425 aa11.9□□□□□ -0.5
HDAC5-208ENST00000588419 KRT80Q6KB66 452 aa11.9□□□□□ -0.5
HDAC5-208ENST00000588419 SLC2A7Q6PXP3 512 aa11.9□□□□□ -0.5
HDAC5-208ENST00000588419 ZCCHC24Q8N2G6 241 aaKnown RBP11.9□□□□□ -0.5
HDAC5-208ENST00000588419 MFSD8Q8NHS3 518 aa11.9□□□□□ -0.5
HDAC5-208ENST00000588419 STK35Q8TDR2 534 aa11.9□□□□□ -0.5
HDAC5-208ENST00000588419 PTDSS2Q9BVG9 487 aa11.9□□□□□ -0.5
HDAC5-208ENST00000588419 TPK1Q9H3S4 243 aa11.9□□□□□ -0.5
HDAC5-208ENST00000588419 PIF1Q9H611 641 aa11.9□□□□□ -0.5
HDAC5-208ENST00000588419 MYOZ1Q9NP98 299 aaPredicted RBP11.9□□□□□ -0.5
HDAC5-208ENST00000588419 IFT52Q9Y366 437 aa11.9□□□□□ -0.5
HDAC5-208ENST00000588419 CHST2Q9Y4C5 530 aa11.9□□□□□ -0.5
HDAC5-208ENST00000588419 M0R082 166 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 M0R3G1 203 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 AIM2O14862 343 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 UBDO15205 165 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 AKAP8O43823 692 aaKnown RBP11.89□□□□□ -0.51
HDAC5-208ENST00000588419 PDE5AO76074 875 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 DAOP14920 347 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 NQO1P15559 274 aaKnown RBP11.89□□□□□ -0.51
HDAC5-208ENST00000588419 ZNF23P17027 643 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 PPOXP50336 477 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 SH3BGRP55822 239 aaPredicted RBP11.89□□□□□ -0.51
HDAC5-208ENST00000588419 WDR4P57081 412 aaKnown RBP11.89□□□□□ -0.51
HDAC5-208ENST00000588419 NCALDP61601 193 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 SNTB2Q13425 540 aaKnown RBP11.89□□□□□ -0.51
HDAC5-208ENST00000588419 CR1LQ2VPA4 569 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 C1QTNF12Q5T7M4 302 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 MDP1Q86V88 176 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 OR4F15Q8NGB8 312 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 BBS10Q8TAM1 723 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 ZNF417Q8TAU3 575 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 OR52B2Q96RD2 323 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 ZNF587Q96SQ5 575 aaPredicted RBP11.89□□□□□ -0.51
HDAC5-208ENST00000588419 SOX7Q9BT81 388 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 LINC00470Q9BZP3 86 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 PLK3Q9H4B4 646 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 CRLF2Q9HC73 371 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 GPR35Q9HC97 309 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 ZIM2Q9NZV7 527 aa11.89□□□□□ -0.51
HDAC5-208ENST00000588419 ZNF503-AS2A6NEH8 195 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 FTCDNL1E5RQL4 147 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 SLCO1B7G3V0H7 640 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 NPIPB7O75200 414 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 SNNO75324 88 aaPredicted RBP11.88□□□□□ -0.51
HDAC5-208ENST00000588419 SERPINI2O75830 405 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 STAMBPO95630 424 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 ZCCHC18P0CG32 403 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 CD79AP11912 226 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 NPR2P20594 1047 aa11.88□□□□□ -0.51
HDAC5-208ENST00000588419 APEX1P27695 318 aaKnown RBP11.88□□□□□ -0.51
HDAC5-208ENST00000588419 GRPRP30550 384 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms