RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 BFARQ9NZS9 450 aa3.64□□□□□ -1.83
LINC00557-201ENST00000563184 ZNF225Q9UK10 706 aa3.64□□□□□ -1.83
LINC00557-201ENST00000563184 TMCO1Q9UM00 188 aa3.64□□□□□ -1.83
LINC00557-201ENST00000563184 PIGLQ9Y2B2 252 aa3.64□□□□□ -1.83
LINC00557-201ENST00000563184 TP53TG5Q9Y2B4 290 aa3.64□□□□□ -1.83
LINC00557-201ENST00000563184 KCNIP3Q9Y2W7 256 aa3.64□□□□□ -1.83
LINC00557-201ENST00000563184 A0A1B0GVL5 298 aa3.63□□□□□ -1.83
LINC00557-201ENST00000563184 OR5B21A6NL26 309 aa3.63□□□□□ -1.83
LINC00557-201ENST00000563184 RIPK2O43353 540 aa3.63□□□□□ -1.83
LINC00557-201ENST00000563184 KLF8O95600 359 aaPredicted RBP3.63□□□□□ -1.83
LINC00557-201ENST00000563184 IL12AP29459 219 aa3.63□□□□□ -1.83
LINC00557-201ENST00000563184 ARRB1P49407 418 aaPredicted RBP3.63□□□□□ -1.83
LINC00557-201ENST00000563184 MAJINQ3KP22 176 aa3.63□□□□□ -1.83
LINC00557-201ENST00000563184 COX15Q7KZN9 410 aa3.63□□□□□ -1.83
LINC00557-201ENST00000563184 PAQR7Q86WK9 346 aa3.63□□□□□ -1.83
LINC00557-201ENST00000563184 MKXQ8IYA7 352 aa3.63□□□□□ -1.83
LINC00557-201ENST00000563184 PIANPQ8IYJ0 282 aa3.63□□□□□ -1.83
LINC00557-201ENST00000563184 TMEM61Q8N0U2 210 aa3.63□□□□□ -1.83
LINC00557-201ENST00000563184 FAM71E2Q8N5Q1 922 aa3.63□□□□□ -1.83
LINC00557-201ENST00000563184 FAM83FQ8NEG4 500 aaPredicted RBP3.63□□□□□ -1.83
LINC00557-201ENST00000563184 OR1L4Q8NGR5 311 aa3.63□□□□□ -1.83
LINC00557-201ENST00000563184 FANK1Q8TC84 345 aa3.63□□□□□ -1.83
LINC00557-201ENST00000563184 FN3KRPQ9HA64 309 aa3.63□□□□□ -1.83
LINC00557-201ENST00000563184 CCL28Q9NRJ3 127 aa3.63□□□□□ -1.83
LINC00557-201ENST00000563184 A0A1B0GUA9 196 aa3.62□□□□□ -1.83
LINC00557-201ENST00000563184 FOXE1O00358 373 aaPredicted RBP3.62□□□□□ -1.83
LINC00557-201ENST00000563184 FMO3P31513 532 aa3.62□□□□□ -1.83
LINC00557-201ENST00000563184 CEBPDP49716 269 aaPredicted RBP3.62□□□□□ -1.83
LINC00557-201ENST00000563184 MPPED2Q15777 294 aa3.62□□□□□ -1.83
LINC00557-201ENST00000563184 BOLA3Q53S33 107 aa3.62□□□□□ -1.83
LINC00557-201ENST00000563184 GPR157Q5UAW9 335 aa3.62□□□□□ -1.83
LINC00557-201ENST00000563184 OR2A2Q6IF42 318 aa3.62□□□□□ -1.83
LINC00557-201ENST00000563184 ZNF546Q86UE3 836 aa3.62□□□□□ -1.83
LINC00557-201ENST00000563184 ZNF606Q8WXB4 792 aa3.62□□□□□ -1.83
LINC00557-201ENST00000563184 NDRG1Q92597 394 aaKnown RBP3.62□□□□□ -1.83
LINC00557-201ENST00000563184 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.62□□□□□ -1.83
LINC00557-201ENST00000563184 OR2M2Q96R28 347 aa3.62□□□□□ -1.83
LINC00557-201ENST00000563184 TMEM246Q9BRR3 403 aa3.62□□□□□ -1.83
LINC00557-201ENST00000563184 CHRDL1Q9BU40 450 aa3.62□□□□□ -1.83
LINC00557-201ENST00000563184 DEFB127Q9H1M4 99 aa3.62□□□□□ -1.83
LINC00557-201ENST00000563184 LY9Q9HBG7 655 aa3.62□□□□□ -1.83
LINC00557-201ENST00000563184 EML4Q9HC35 981 aaKnown RBP3.62□□□□□ -1.83
LINC00557-201ENST00000563184 GIN1Q9NXP7 522 aa3.62□□□□□ -1.83
LINC00557-201ENST00000563184 ZNF639Q9UID6 485 aa3.62□□□□□ -1.83
LINC00557-201ENST00000563184 IGLV3-22A0A075B6J6 115 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 A0A0G2JN53 185 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 A0A1W2PPE3 182 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 C12orf77C9JDV5 145 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 GAPDHP04406 335 aaKnown RBP3.61□□□□□ -1.83
LINC00557-201ENST00000563184 PSG2P11465 335 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 TBPP20226 339 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 RPS10P46783 165 aaKnown RBP3.61□□□□□ -1.83
LINC00557-201ENST00000563184 CAPRIN1Q14444 709 aaKnown RBP3.61□□□□□ -1.83
LINC00557-201ENST00000563184 DGUOKQ16854 277 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 KDELC1Q6UW63 502 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 C6orf89Q6UWU4 347 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 Q6ZVH6 145 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 ACOT4Q8N9L9 421 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 ACOT11Q8WXI4 607 aaPredicted RBP3.61□□□□□ -1.83
LINC00557-201ENST00000563184 FGF14Q92915 247 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 LINC00167Q96N53 147 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 ZNF641Q96N77 438 aaPredicted RBP3.61□□□□□ -1.83
LINC00557-201ENST00000563184 ZNF285Q96NJ3 590 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 ZBTB18Q99592 522 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 RIOK2Q9BVS4 552 aaKnown RBP3.61□□□□□ -1.83
LINC00557-201ENST00000563184 FAIM2Q9BWQ8 316 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 ROGDIQ9GZN7 287 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 SRMSQ9H3Y6 488 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 AZI2Q9H6S1 392 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 SGK2Q9HBY8 427 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 ASB3Q9Y575 518 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 CACNG2Q9Y698 323 aa3.61□□□□□ -1.83
LINC00557-201ENST00000563184 PCP4L1A6NKN8 68 aa3.6□□□□□ -1.83
LINC00557-201ENST00000563184 B4GALT2O60909 372 aa3.6□□□□□ -1.83
LINC00557-201ENST00000563184 LHX2P50458 406 aa3.6□□□□□ -1.83
LINC00557-201ENST00000563184 SH3BGRP55822 239 aaPredicted RBP3.6□□□□□ -1.83
LINC00557-201ENST00000563184 OGDHQ02218 1023 aa3.6□□□□□ -1.83
LINC00557-201ENST00000563184 ACVR1Q04771 509 aa3.6□□□□□ -1.83
LINC00557-201ENST00000563184 KIAA0087Q14695 138 aa3.6□□□□□ -1.83
LINC00557-201ENST00000563184 NUDCD3Q8IVD9 361 aa3.6□□□□□ -1.83
LINC00557-201ENST00000563184 NPBQ8NG41 125 aa3.6□□□□□ -1.83
LINC00557-201ENST00000563184 RNF185Q96GF1 192 aa3.6□□□□□ -1.83
LINC00557-201ENST00000563184 C12orf42Q96LP6 360 aa3.6□□□□□ -1.83
LINC00557-201ENST00000563184 PPA2Q9H2U2 334 aa3.6□□□□□ -1.83
LINC00557-201ENST00000563184 ANKRD19PQ9H560 264 aa3.6□□□□□ -1.83
LINC00557-201ENST00000563184 NIPAL2Q9H841 368 aa3.6□□□□□ -1.83
LINC00557-201ENST00000563184 NMRAL1Q9HBL8 299 aa3.6□□□□□ -1.83
LINC00557-201ENST00000563184 KCNIP1Q9NZI2 227 aa3.6□□□□□ -1.83
LINC00557-201ENST00000563184 MMP17Q9ULZ9 603 aa3.6□□□□□ -1.83
LINC00557-201ENST00000563184 A0A1W2PNU3 283 aaPredicted RBP3.59□□□□□ -1.83
LINC00557-201ENST00000563184 A0A1W2PPV9 198 aa3.59□□□□□ -1.83
LINC00557-201ENST00000563184 BTBD17A6NE02 478 aa3.59□□□□□ -1.83
LINC00557-201ENST00000563184 TOM1O60784 492 aa3.59□□□□□ -1.83
LINC00557-201ENST00000563184 GIPP09681 153 aaPredicted RBP3.59□□□□□ -1.83
LINC00557-201ENST00000563184 ATP1B2P14415 290 aaPredicted RBP3.59□□□□□ -1.83
LINC00557-201ENST00000563184 CRISP2P16562 243 aa3.59□□□□□ -1.83
LINC00557-201ENST00000563184 CMA1P23946 247 aa3.59□□□□□ -1.83
LINC00557-201ENST00000563184 TAGLN2P37802 199 aaKnown RBP3.59□□□□□ -1.83
LINC00557-201ENST00000563184 SCRN3Q0VDG4 424 aa3.59□□□□□ -1.83
LINC00557-201ENST00000563184 PDIA2Q13087 525 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms