RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 MBD3L2Q8NHZ7 208 aaPredicted RBP9.52□□□□□ -0.89
NPIPB3-210ENST00000542817 ABHD3Q8WU67 409 aa9.52□□□□□ -0.89
NPIPB3-210ENST00000542817 CPNE4Q96A23 557 aaPredicted RBP9.52□□□□□ -0.89
NPIPB3-210ENST00000542817 SLC25A36Q96CQ1 311 aa9.52□□□□□ -0.89
NPIPB3-210ENST00000542817 NRBF2Q96F24 287 aa9.52□□□□□ -0.89
NPIPB3-210ENST00000542817 TNFRSF13CQ96RJ3 184 aa9.52□□□□□ -0.89
NPIPB3-210ENST00000542817 FEVQ99581 238 aa9.52□□□□□ -0.89
NPIPB3-210ENST00000542817 NIPSNAP1Q9BPW8 284 aa9.52□□□□□ -0.89
NPIPB3-210ENST00000542817 TTYH2Q9BSA4 534 aa9.52□□□□□ -0.89
NPIPB3-210ENST00000542817 GABARAPL1Q9H0R8 117 aa9.52□□□□□ -0.89
NPIPB3-210ENST00000542817 TP63Q9H3D4 680 aaPredicted RBP9.52□□□□□ -0.89
NPIPB3-210ENST00000542817 RNF122Q9H9V4 155 aa9.52□□□□□ -0.89
NPIPB3-210ENST00000542817 MCCC2Q9HCC0 563 aa9.52□□□□□ -0.89
NPIPB3-210ENST00000542817 REV1Q9UBZ9 1251 aa9.52□□□□□ -0.89
NPIPB3-210ENST00000542817 ZNF229Q9UJW7 825 aa9.52□□□□□ -0.89
NPIPB3-210ENST00000542817 HIF3AQ9Y2N7 669 aa9.52□□□□□ -0.89
NPIPB3-210ENST00000542817 MEMO1Q9Y316 297 aa9.52□□□□□ -0.89
NPIPB3-210ENST00000542817 IGKV3D-15A0A087WSY6 115 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 LOC102725191A0A1B0GVB3 256 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 HTR3EA5X5Y0 456 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 PRRG2O14669 202 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 CCNB2O95067 398 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 MT-ATP6P00846 226 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 GABRA1P14867 456 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 ANPEPP15144 967 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 FPR3P25089 353 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 IFNA8P32881 189 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 PTGER4P35408 488 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 DAPP51397 102 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 SLC16A1P53985 500 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 RPS3AP61247 264 aaKnown RBP9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 CSNK2A1P68400 391 aaPredicted RBP9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 PPP2R2BQ00005 443 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 SRSF1Q07955 248 aaKnown RBP eCLIP9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 FOXF2Q12947 444 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 SLC17A1Q14916 467 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 CD300LDQ6UXZ3 194 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 THSD4Q6ZMP0 1018 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 AQP11Q8NBQ7 271 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 ADPRHL1Q8NDY3 354 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 OR10G2Q8NGC3 310 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 OR13C2Q8NGS9 318 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 OR5K1Q8NHB7 308 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 PIGXQ8TBF5 258 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 WNT2BQ93097 391 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 TRIB1Q96RU8 372 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 SLC29A1Q99808 456 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 DGCR6LQ9BY27 220 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 KLHL4Q9C0H6 718 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 CHST11Q9NPF2 352 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 NANSQ9NR45 359 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 PAQR5Q9NXK6 330 aaPredicted RBP9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 PDP1Q9P0J1 537 aaPredicted RBP9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 KLHL13Q9P2N7 655 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 TMEFF2Q9UIK5 374 aaPredicted RBP9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 OAZ3Q9UMX2 235 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 SIGLEC7Q9Y286 467 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 B3GALT5Q9Y2C3 310 aa9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 DIDO1Q9BTC0 2240 aaKnown RBP9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 PHF3Q92576 2039 aaKnown RBP9.51□□□□□ -0.89
NPIPB3-210ENST00000542817 SPTAN1Q13813 2472 aaKnown RBP9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 NCOA6Q14686 2063 aaPredicted RBP9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 SPTBN1Q01082 2364 aaKnown RBP9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 INTS1Q8N201 2190 aaKnown RBP9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 TRAV27A0A087WT01 109 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 A0A0G2JNJ9 132 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 A0A1W2PNV4 684 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 SLC22A20A6NK97 555 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 FIGNL2A6NMB9 653 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 EFCAB9A8MZ26 197 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 E9PLN8 166 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 E9PQ18 207 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 TRAF3IP2O43734 574 aaPredicted RBP9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 OR10H3O60404 316 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 TNFSF13O75888 250 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 RCBTB2O95199 551 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 LYNP07948 512 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 HOXD4P09016 255 aaPredicted RBP9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 POU2F1P14859 743 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 GSTT1P30711 240 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 TIMP3P35625 211 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 AQP2P41181 271 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 KIR2DL2P43627 348 aaPredicted RBP9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 NUP107P57740 925 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 ADORA2A-AS1P86434 159 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 RBPJQ06330 500 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 RPL18Q07020 188 aaKnown RBP9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 ZP4Q12836 540 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 TSPAN31Q12999 210 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 PDK3Q15120 406 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 POU4F3Q15319 338 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 CDSNQ15517 529 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 SGCBQ16585 318 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 OTUD3Q5T2D3 398 aaPredicted RBP9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 PDSS1Q5T2R2 415 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 B3GNT6Q6ZMB0 384 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 H1FNTQ75WM6 255 aaPredicted RBP9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 FCRLAQ7L513 359 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 OR8D4Q8NGM9 314 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 OR5J2Q8NH18 312 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms