RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 KCNJ2P63252 427 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 CSNK1G2P78368 415 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 SRSF5Q13243 272 aaKnown RBP2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 PPIL2Q13356 520 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 GPNMBQ14956 572 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 KRTAP27-1Q3LI81 207 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 XKR7Q5GH72 579 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 MARCH8Q5T0T0 291 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 FHL5Q5TD97 284 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 CARD17Q5XLA6 110 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 TMIGD1Q6UXZ0 262 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 LRRC31Q6UY01 552 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 CERS6Q6ZMG9 384 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 FAM220AQ7Z4H9 259 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 PIANPQ8IYJ0 282 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 CEND1Q8N111 149 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 VN1R2Q8NFZ6 395 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 OR52I1Q8NGK6 324 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 LINC01006Q8NI28 216 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 NEIL3Q8TAT5 605 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 UCN3Q969E3 161 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 C16orf74Q96GX8 76 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 C12orf42Q96LP6 360 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 MBOAT4Q96T53 435 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 NUP58Q9BVL2 599 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 RACGAP1Q9H0H5 632 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 SLC25A22Q9H936 323 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 PLGRKTQ9HBL7 147 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 AIG1Q9NVV5 245 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 KLHL28Q9NXS3 571 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 KCNIP3Q9Y2W7 256 aa2.34□□□□□ -2.03
RNU6-390P-201ENST00000516259 TCP11X1B4DZS4 312 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 C9JVG2 144 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 SGK1O00141 431 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 DYNC1I1O14576 645 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 AGPAT2O15120 278 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 SLC31A2O15432 143 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 MGRN1O60291 552 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 ERLIN1O75477 346 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 MMP23AO75900 390 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 C1orf105O95561 183 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 GAPDHP04406 335 aaKnown RBP2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 COX7A1P24310 79 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 CCNCP24863 283 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 FOXN2P32314 431 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 TPMTP51580 245 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 KRTAP10-12P60413 245 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 CUL2Q13617 745 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 ATP6AP1Q15904 470 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 BCL7AQ4VC05 210 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 RNASEKQ6P5S7 137 aaKnown RBP2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 SCD5Q86SK9 330 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 PRR22Q8IZ63 422 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 TTC5Q8N0Z6 440 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 FBXL16Q8N461 479 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 OR6C4Q8NGE1 309 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 OR10G9Q8NGN4 311 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 OR1L6Q8NGR2 347 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 ZNF564Q8TBZ8 553 aaPredicted RBP2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 FRAT1Q92837 279 aaPredicted RBP2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 SLC38A4Q969I6 547 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 ZNF578Q96N58 590 aaPredicted RBP2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 TECTBQ96PL2 329 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 CHP1Q99653 195 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 TMEM246Q9BRR3 403 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 MRPL47Q9HD33 250 aaKnown RBP2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 TREM2Q9NZC2 230 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 ADAM22Q9P0K1 906 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 PSMC3IPQ9P2W1 217 aaPredicted RBP2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 PISDQ9UG56 409 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 NUP50Q9UKX7 468 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 STARD10Q9Y365 291 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 CSDC2Q9Y534 153 aaKnown RBP2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 TTC21BQ7Z4L5 1316 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 AKNAQ7Z591 1439 aa2.33□□□□□ -2.04
RNU6-390P-201ENST00000516259 BTBD17A6NE02 478 aa2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 A6NIZ1 184 aa2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 DLGAP1O14490 977 aa2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 CACNG3O60359 315 aa2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 TOP1P11387 765 aaKnown RBP2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 TDGF1P13385 188 aa2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 TNNI1P19237 187 aa2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 CXCR2P25025 360 aa2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 OR3A4PP47883 348 aa2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 NPBWR2P48146 333 aa2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 TDGF1P3P51864 188 aa2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 TAS2R19P59542 299 aa2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 RAP1BP61224 184 aa2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 LYZP61626 148 aa2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 SELENOTP62341 195 aa2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 MRPS22P82650 360 aaKnown RBP2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 ARFRP1Q13795 201 aa2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 SPANXN2Q5MJ10 180 aa2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 VAX1Q5SQQ9 334 aa2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 PRAMEF20Q5VT98 475 aa2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 H2AFVQ71UI9 128 aa2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 BIVMQ86UB2 503 aa2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 GTPBP8Q8N3Z3 284 aaPredicted RBP2.32□□□□□ -2.04
RNU6-390P-201ENST00000516259 C11orf42Q8N5U0 333 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms