RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 NIPAL2Q9H841 368 aa3.12□□□□□ -1.91
SMNDC1-205ENST00000477763 MMP26Q9NRE1 261 aa3.12□□□□□ -1.91
SMNDC1-205ENST00000477763 GLRX2Q9NS18 164 aa3.12□□□□□ -1.91
SMNDC1-205ENST00000477763 GIN1Q9NXP7 522 aa3.12□□□□□ -1.91
SMNDC1-205ENST00000477763 RABL2BQ9UNT1 228 aa3.12□□□□□ -1.91
SMNDC1-205ENST00000477763 IKBKGQ9Y6K9 419 aa3.12□□□□□ -1.91
SMNDC1-205ENST00000477763 NOTCH2Q04721 2471 aa3.12□□□□□ -1.91
SMNDC1-205ENST00000477763 LRRK1Q38SD2 2015 aa3.12□□□□□ -1.91
SMNDC1-205ENST00000477763 COL16A1Q07092 1604 aaPredicted RBP3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 A0A1B0GUA9 196 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 PINLYPA6NC86 204 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 OR52A4PA6NMU1 304 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 NPIPB7O75200 414 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 GIPP09681 153 aaPredicted RBP3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 ZNF853P0CG23 659 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 HPGDP15428 266 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 MGMTP16455 207 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 HSD17B2P37059 387 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 GYG1P46976 350 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 SH3BGRP55822 239 aaPredicted RBP3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 SEC61GP60059 68 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 SCRN3Q0VDG4 424 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 MRPL28Q13084 256 aaKnown RBP3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 DAZ2Q13117 558 aaKnown RBP3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 GPR157Q5UAW9 335 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 ENPP6Q6UWR7 440 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 PAQR7Q86WK9 346 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 OTUD6BQ8N6M0 293 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 OR1L4Q8NGR5 311 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 OR13C2Q8NGS9 318 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 FANK1Q8TC84 345 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 ARPC1AQ92747 370 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 MBOAT4Q96T53 435 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 OR11A1Q9GZK7 315 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 PPA2Q9H2U2 334 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 SIAEQ9HAT2 523 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 DAZ3Q9NR90 486 aaKnown RBP3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 NUFIP1Q9UHK0 495 aaKnown RBP3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 KCNIP3Q9Y2W7 256 aa3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 RRP15Q9Y3B9 282 aaKnown RBP3.11□□□□□ -1.91
SMNDC1-205ENST00000477763 ZNF861PO60384 105 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 INSP01308 110 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 KRT6AP02538 564 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 IGHV4-34P06331 123 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 CHTF8P0CG12 524 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 SLC2A5P22732 501 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 CCNE1P24864 410 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 NUDT1P36639 197 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 CTRLP40313 264 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 CSNK1DP48730 415 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 MPPED2Q15777 294 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 MAJINQ3KP22 176 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 C6orf226Q5I0X4 101 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 PHYHD1Q5SRE7 291 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 ZNF620Q6ZNG0 422 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 H2BFWTQ7Z2G1 175 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 KRTAP11-1Q8IUC1 163 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 FAM71E2Q8N5Q1 922 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 OR8J1Q8NGP2 316 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 ACOT11Q8WXI4 607 aaPredicted RBP3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 SHC3Q92529 594 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 MYDGFQ969H8 173 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 FCRL1Q96LA6 429 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 TRIM62Q9BVG3 475 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 RNF167Q9H6Y7 350 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 NMRAL1Q9HBL8 299 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 SLC25A15Q9Y619 301 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 CACNG2Q9Y698 323 aa3.1□□□□□ -1.91
SMNDC1-205ENST00000477763 RAI1Q7Z5J4 1906 aaPredicted RBP3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 C12orf71A8MTZ7 269 aa3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 H0Y8G0 127 aa3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 HAS3O00219 553 aa3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 FAM189A1O60320 539 aa3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 RPS2P15880 293 aaKnown RBP3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 NCF2P19878 526 aaPredicted RBP3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 SULT1E1P49888 294 aa3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 ZNF133P52736 654 aaPredicted RBP3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 ATP5IP56385 69 aaPredicted RBP3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 CKAP4Q07065 602 aaKnown RBP3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 DDX39BQ13838 428 aaKnown RBP3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 DGUOKQ16854 277 aa3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 C6orf89Q6UWU4 347 aa3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 LRRC31Q6UY01 552 aa3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 CCDC73Q6ZRK6 1079 aa3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 RFLNAQ6ZTI6 216 aa3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 NANOGNBQ7Z5D8 188 aa3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 ZNF546Q86UE3 836 aa3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 RALGPS2Q86X27 583 aaPredicted RBP3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 MFSD6LQ8IWD5 586 aa3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 MKXQ8IYA7 352 aa3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 UBE2J2Q8N2K1 259 aa3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 OR6X1Q8NH79 312 aa3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 NDRG1Q92597 394 aaKnown RBP3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 STMN2Q93045 179 aa3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 CNN2Q99439 309 aaKnown RBP3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 TMEM246Q9BRR3 403 aa3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 PELOQ9BRX2 385 aaKnown RBP3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 RIOK2Q9BVS4 552 aaKnown RBP3.09□□□□□ -1.91
SMNDC1-205ENST00000477763 ROPN1BQ9BZX4 212 aaPredicted RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms