RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 SH3BGRP55822 239 aaPredicted RBP4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 LMO4P61968 165 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 KCNJ10P78508 379 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 SNTB2Q13425 540 aaKnown RBP4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 CEACAM7Q14002 265 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 DOC2BQ14184 412 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 OR7A5Q15622 319 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 CCDC153Q494R4 210 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 XKR7Q5GH72 579 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 KRT80Q6KB66 452 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 FAHD2BQ6P2I3 314 aaPredicted RBP4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 CREB3L2Q70SY1 520 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 HMGN2P46Q86SG4 172 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 GPAT4Q86UL3 456 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 C10orf107Q8IVU9 208 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 DDIASQ8IXT1 998 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 CLECL1Q8IZS7 167 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 ARFGAP2Q8N6H7 521 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 NATD1Q8N6N6 113 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 ZDHHC22Q8N966 263 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 NOA1Q8NC60 698 aaKnown RBP4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 OR51F2Q8NH61 342 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 CNOT9Q92600 299 aaKnown RBP4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 PMM1Q92871 262 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 RAB8BQ92930 207 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 ROPN1LQ96C74 230 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 FAHD2AQ96GK7 314 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 SLC35G5Q96KT7 338 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 PPP3R2Q96LZ3 170 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 SLC6A7Q99884 636 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 C1orf50Q9BV19 199 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 GATA5Q9BWX5 397 aaPredicted RBP4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 SUCNR1Q9BXA5 334 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 TMPRSS13Q9BYE2 586 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 LINC00470Q9BZP3 86 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 OR51I1Q9H343 314 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 PIF1Q9H611 641 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 NOX3Q9HBY0 568 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 G6PC2Q9NQR9 355 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 POLE3Q9NRF9 147 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 EXD2Q9NVH0 621 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 TREM2Q9NZC2 230 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 ARMCX1Q9P291 453 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 TBK1Q9UHD2 729 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 CMAHPQ9Y471 501 aa4.41□□□□□ -1.7
SNRNP40-204ENST00000474025 VSTM5A8MXK1 200 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 RPL36A-HNRNPH2H7BZ11 118 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 M0R233 179 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 RNASET2O00584 256 aaKnown RBP4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 FRS3O43559 492 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 RP2O75695 350 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF432O94892 652 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 ALX3O95076 343 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 VAMP5O95183 116 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 AGR2O95994 175 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 FGF4P08620 206 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 HKR1P10072 659 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 CBR1P16152 277 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 ADRA2CP18825 462 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 TCN1P20061 433 aaPredicted RBP4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 COL8A2P25067 703 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 ALDH3B1P43353 468 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 EVX1P49640 407 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 TMEM33P57088 247 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 UBA52P62987 128 aaKnown RBP4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 MRPS11P82912 194 aaKnown RBP4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 ARF1P84077 181 aaKnown RBP4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 ROR2Q01974 943 aaKnown RBP4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 CKAP4Q07065 602 aaKnown RBP4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 EPS8Q12929 822 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 NPRL3Q12980 569 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 DAG1Q14118 895 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 PCLAFQ15004 111 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 SLC9B1Q4ZJI4 515 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 MIDNQ504T8 468 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 NKAPLQ5M9Q1 402 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 C6orf136Q5SQH8 315 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 ATAD3BQ5T9A4 648 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 IL23RQ5VWK5 629 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 PRAMEF8Q5VWM4 474 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 PRAMEF7Q5VXH5 474 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 SAXO2Q658L1 398 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 HIST2H2BDQ6DRA6 164 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 OR4F3Q6IEY1 312 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 NIPAL3Q6P499 406 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 TNFAIP8L2Q6P589 184 aaPredicted RBP4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 SYT10Q6XYQ8 523 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 C1QL2Q7Z5L3 287 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 MDP1Q86V88 176 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 EPHX4Q8IUS5 362 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 CMIPQ8IY22 773 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 CNPY4Q8N129 248 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 RIBC1Q8N443 379 aaPredicted RBP4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 CCDC63Q8NA47 563 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 FNDC5Q8NAU1 212 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 IL17RDQ8NFM7 739 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 XAGE5Q8WWM1 108 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 RDH5Q92781 318 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 YIPF5Q969M3 257 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 MRPL24Q96A35 216 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms