RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 PNPLA2Q96AD5 504 aa11.9□□□□□ -0.5
PDZRN3-205ENST00000466780 HSPA12BQ96MM6 686 aa11.9□□□□□ -0.5
PDZRN3-205ENST00000466780 STACQ99469 402 aa11.9□□□□□ -0.5
PDZRN3-205ENST00000466780 OPN4Q9UHM6 478 aa11.9□□□□□ -0.5
PDZRN3-205ENST00000466780 SLC17A4Q9Y2C5 497 aa11.9□□□□□ -0.5
PDZRN3-205ENST00000466780 MRPS2Q9Y399 296 aaKnown RBP11.9□□□□□ -0.5
PDZRN3-205ENST00000466780 OR6C68A6NDL8 312 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 ACOT7O00154 380 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 TOR1AO14656 332 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 CTSVO60911 334 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 NDUFB2O95178 105 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 FGF2P09038 288 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 GABRA1P14867 456 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 AK4P27144 223 aaPredicted RBP11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 WASP42768 502 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 MGAT2Q10469 447 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 GXYLT1Q4G148 440 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 B3GNTL1Q67FW5 361 aaPredicted RBP11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 CFAP77Q6ZQR2 320 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 SLC36A1Q7Z2H8 476 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 DNAAF1Q8NEP3 725 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 TM4SF19Q96DZ7 209 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 OR2A5Q96R48 311 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 KIR3DX1Q9H7L2 352 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 RWDD3Q9Y3V2 267 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 SESN1Q9Y6P5 492 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 A0A087WV62 115 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 KRBOX1C9JBD0 128 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 B3GALT2O43825 422 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 RP2O75695 350 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 RAB40ALP0C0E4 278 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 SLC35G6P0C7Q6 338 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 SPI1P17947 270 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 TLX1P31314 330 aaPredicted RBP11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 RBM34P42696 430 aaKnown RBP11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 MRPS10P82664 201 aaKnown RBP11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 STX4Q12846 297 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 ZNF684Q5T5D7 378 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 OR7E24Q6IFN5 339 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 LINC00114Q6XXX2 140 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 STAC2Q6ZMT1 411 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 DNM1P46Q6ZS02 220 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 PRSS41Q7RTY9 318 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 OR6K6Q8NGW6 343 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 LCN9Q8WX39 176 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 RAB40AQ8WXH6 277 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 FBXW5Q969U6 566 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 MIB2Q96AX9 1013 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 DPYSL5Q9BPU6 564 aa11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 EXOSC3Q9NQT5 275 aaKnown RBP11.89□□□□□ -0.51
PDZRN3-205ENST00000466780 HMSDA8MTL9 139 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 NUPL2O15504 423 aaKnown RBP11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 IFNA16P05015 189 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 HNRNPA1P09651 372 aaKnown RBP eCLIP11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 CALCBP10092 127 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 ADH7P40394 386 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 ART1P52961 327 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 UBE2MP61081 183 aaKnown RBP11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 MELKQ14680 651 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 ZMYND11Q15326 602 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 PRICKLE4Q2TBC4 344 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 SLC43A2Q8N370 569 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 BVESQ8NE79 360 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 ZNF707Q96C28 371 aaPredicted RBP11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 LRFN5Q96NI6 719 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 GINS4Q9BRT9 223 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 ARL6Q9H0F7 186 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 CAPN10Q9HC96 672 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 DNAJB12Q9NXW2 375 aaKnown RBP11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 FBXL21Q9UKT6 434 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 ZNF346Q9UL40 294 aaKnown RBP11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 A0A1B0GVT2 93 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 C4orf47A7E2U8 309 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 FAM171A2A8MVW0 826 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 CTNSO60931 367 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 ZNF35P13682 527 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 PPP3CBP16298 524 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 MNDAP41218 407 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 DLX5P56178 289 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 MAT1AQ00266 395 aaKnown RBP11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 C2orf27AQ580R0 203 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 DCAF12L2Q5VW00 463 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 KIRREL2Q6UWL6 708 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 DND1Q8IYX4 353 aaKnown RBP11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 OR1S1Q8NH92 325 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 FLVCR1-AS1Q8TAF5 88 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 SGTBQ96EQ0 304 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 MYADMQ96S97 322 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 NMNAT2Q9BZQ4 307 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 TTYH1Q9H313 450 aaPredicted RBP11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 THAP10Q9P2Z0 257 aaPredicted RBP11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 PFDN2Q9UHV9 154 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 SPTBP11277 2137 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 A0A1W2PP55 124 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 LGALS3BPQ08380 585 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 CST6Q15828 149 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 LINC01590Q5TEZ4 76 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 SLC35F3Q8IY50 421 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 RASD2Q96D21 266 aa11.88□□□□□ -0.51
PDZRN3-205ENST00000466780 LDAHQ9H6V9 325 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms