RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 RAB17Q9H0T7 212 aa3.13□□□□□ -1.91
CKS1BP3-201ENST00000600888 EHD1Q9H4M9 534 aa3.13□□□□□ -1.91
CKS1BP3-201ENST00000600888 NT5DC2Q9H857 520 aa3.13□□□□□ -1.91
CKS1BP3-201ENST00000600888 MYNNQ9NPC7 610 aa3.13□□□□□ -1.91
CKS1BP3-201ENST00000600888 PPANQ9NQ55 473 aaKnown RBP3.13□□□□□ -1.91
CKS1BP3-201ENST00000600888 TMEM181Q9P2C4 612 aa3.13□□□□□ -1.91
CKS1BP3-201ENST00000600888 CTSFQ9UBX1 484 aa3.13□□□□□ -1.91
CKS1BP3-201ENST00000600888 CACNG5Q9UF02 275 aa3.13□□□□□ -1.91
CKS1BP3-201ENST00000600888 C3orf18Q9UK00 162 aa3.13□□□□□ -1.91
CKS1BP3-201ENST00000600888 FBXL4Q9UKA2 621 aa3.13□□□□□ -1.91
CKS1BP3-201ENST00000600888 OARD1Q9Y530 152 aa3.13□□□□□ -1.91
CKS1BP3-201ENST00000600888 SPENQ96T58 3664 aaKnown RBP3.13□□□□□ -1.91
CKS1BP3-201ENST00000600888 ZNF407Q9C0G0 2248 aa3.13□□□□□ -1.91
CKS1BP3-201ENST00000600888 NINQ8N4C6 2090 aa3.13□□□□□ -1.91
CKS1BP3-201ENST00000600888 A0A0A6YYC8 382 aaPredicted RBP3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 NSG1A0A0A6YYJ2 146 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 TCRBV9S1A1TA0A576 114 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 URADA6NGE7 173 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 MSGN1A6NI15 193 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 TRIM77I1YAP6 450 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 I3L1I5 382 aaPredicted RBP3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 RAD51CO43502 376 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 SPRY1O43609 319 aaPredicted RBP3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 GALR3O60755 368 aaPredicted RBP3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 ALOX12BO75342 701 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 KHDRBS3O75525 346 aaKnown RBP3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 CDC123O75794 336 aaPredicted RBP3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 SERPINA6P08185 405 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 C8orf89P0DMQ9 161 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 SMIM10L1P0DMW3 83 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 C1GALT1C1LP0DN25 315 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 CXCR2P25025 360 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 SSTR1P30872 391 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 CASQ1P31415 396 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 HPDP32754 393 aaPredicted RBP3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 SPRP35270 261 aaPredicted RBP3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 GP5P40197 560 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 TSFMP43897 325 aaKnown RBP3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 SLC6A12P48065 614 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 EFNA3P52797 238 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 ARFIP1P53367 373 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 MAPK12P53778 367 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 GPX6P59796 221 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 ATP6V0D1P61421 351 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 REEP5Q00765 189 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 GUCY2DQ02846 1103 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 CKAP4Q07065 602 aaKnown RBP3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 TSTA3Q13630 321 aaPredicted RBP3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 FASTKD3Q14CZ7 662 aaKnown RBP3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 HERC3Q15034 1050 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 TOMM20Q15388 145 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 TGFBIQ15582 683 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 IGFBP7Q16270 282 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 INAQ16352 499 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 ODF4Q2M2E3 257 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 ADPRMQ3LIE5 342 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 UGT3A2Q3SY77 523 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 C9orf152Q5JTZ5 239 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 PRR27Q6MZM9 219 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 MBOAT1Q6ZNC8 495 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 C3orf62Q6ZUJ4 267 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 NUP54Q7Z3B4 507 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 CPEB2Q7Z5Q1 589 aaKnown RBP3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 ADCK2Q7Z695 626 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 THOC6Q86W42 341 aaKnown RBP3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 ZBED8Q8IZ13 594 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 CDK20Q8IZL9 346 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 THAP8Q8NA92 274 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 TTLQ8NG68 377 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 OR52N5Q8NH56 324 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 OR51Q1Q8NH59 317 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 M1APQ8TC57 530 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 FBXO25Q8TCJ0 367 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 ANKRD49Q8WVL7 239 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 SLC13A3Q8WWT9 602 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 SLC5A11Q8WWX8 675 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 METTL21AQ8WXB1 218 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 DYRK2Q92630 601 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 NEIL2Q969S2 332 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 PYCR2Q96C36 320 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 SNRNP40Q96DI7 357 aaKnown RBP3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 WDR34Q96EX3 536 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 CFAP36Q96G28 342 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 SMIM10Q96HG1 83 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 CYTH2Q99418 400 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 GPR22Q99680 433 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 AIF1LQ9BQI0 150 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 FUT8Q9BYC5 575 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 OR2B2Q9GZK3 357 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 TSPYL1Q9H0U9 437 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 ATG10Q9H0Y0 220 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 CNOT10Q9H9A5 744 aaKnown RBP3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 ANKHQ9HCJ1 492 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 ZDHHC18Q9NUE0 388 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 TRPC4Q9UBN4 977 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 C19orf25Q9UFG5 118 aaPredicted RBP3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 IKZF3Q9UKT9 509 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 SNX24Q9Y343 169 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 MRPS2Q9Y399 296 aaKnown RBP3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 UTP11Q9Y3A2 253 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms