RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 C12orf71A8MTZ7 269 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 B4E171 279 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 C9J4A7 227 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 IFNGP01579 166 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 CELA2AP08217 269 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 CYC1P08574 325 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 TSPAN7P41732 249 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 SERPINB10P48595 397 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 PRPS1P60891 318 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.54□□□□□ -1.04
LINC00838-201ENST00000562956 BTBD16Q32M84 506 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 CCDC58Q4VC31 144 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 LYPD8Q6UX82 237 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 ZFP41Q8N8Y5 198 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 KBTBD8Q8NFY9 601 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 ZPLD1Q8TCW7 415 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 TMEM203Q969S6 136 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 RELTQ969Z4 430 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 TMCO6Q96DC7 493 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 NMNAT3Q96T66 252 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 TIMP4Q99727 224 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 NPAS1Q99742 590 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 EXOSC4Q9NPD3 245 aaKnown RBP8.54□□□□□ -1.04
LINC00838-201ENST00000562956 HIF3AQ9Y2N7 669 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 YARS2Q9Y2Z4 477 aaKnown RBP8.54□□□□□ -1.04
LINC00838-201ENST00000562956 LOXL2Q9Y4K0 774 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 UGT2A1Q9Y4X1 527 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 HRH3Q9Y5N1 445 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 IGHV1-45A0A0A0MS14 117 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 TNFRSF10AO00220 468 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 TSPAN19P0C672 248 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 PSMA1P25786 263 aaKnown RBP8.54□□□□□ -1.04
LINC00838-201ENST00000562956 GTF2E2P29084 291 aaKnown RBP8.54□□□□□ -1.04
LINC00838-201ENST00000562956 ADGRG3Q86Y34 549 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 NAXDQ8IW45 347 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 ACBD7Q8N6N7 88 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 LRRC75AQ8NAA5 344 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 NPEPL1Q8NDH3 523 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 OR51L1Q8NGJ5 315 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 ELP5Q8TE02 316 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 SPRYD4Q8WW59 207 aaPredicted RBP8.54□□□□□ -1.04
LINC00838-201ENST00000562956 ZNRF4Q8WWF5 429 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 GPX7Q96SL4 187 aaPredicted RBP8.54□□□□□ -1.04
LINC00838-201ENST00000562956 ISG20L2Q9H9L3 353 aaKnown RBP8.54□□□□□ -1.04
LINC00838-201ENST00000562956 ADGRL4Q9HBW9 690 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 AKIP1Q9NQ31 210 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 SEC14L4Q9UDX3 406 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 STUB1Q9UNE7 303 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 TEX13CA0A0J9YWL9 993 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 TMEM72A0PK05 275 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 ARPC3O15145 178 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 IDH3BO43837 385 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 SERPINI2O75830 405 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 F13BP05160 661 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 UQCRC1P31930 480 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 POLR2HP52434 150 aaKnown RBP8.53□□□□□ -1.04
LINC00838-201ENST00000562956 MRPS15P82914 257 aaKnown RBP8.53□□□□□ -1.04
LINC00838-201ENST00000562956 ARMC4Q5T2S8 1044 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 DCAF12Q5T6F0 453 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 ZNF322Q6U7Q0 402 aaPredicted RBP8.53□□□□□ -1.04
LINC00838-201ENST00000562956 KLHL36Q8N4N3 616 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 OR10H4Q8NGA5 316 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 OR10G3Q8NGC4 313 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 OR2Y1Q8NGV0 311 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 DDOQ99489 341 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 DEFB126Q9BYW3 111 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 WDR12Q9GZL7 423 aaKnown RBP8.53□□□□□ -1.04
LINC00838-201ENST00000562956 RERGLQ9H628 205 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 ISYNA1Q9NPH2 558 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 TAS2R10Q9NYW0 307 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 MED11Q9P086 117 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 KLHL21Q9UJP4 597 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 CAB39Q9Y376 341 aaPredicted RBP8.53□□□□□ -1.04
LINC00838-201ENST00000562956 HS3ST3B1Q9Y662 390 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 TTC28Q96AY4 2481 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 TMED7-TICAM2A0A0A6YYA0 188 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 OR6C68A6NDL8 312 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 PLD2O14939 933 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 SUSD5O60279 629 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 STK17BO94768 372 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 BGLAPP02818 100 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 SBK2P0C263 348 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 COX6A1P12074 109 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 NAGAP17050 411 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 RPS25P62851 125 aaKnown RBP8.53□□□□□ -1.04
LINC00838-201ENST00000562956 INSM1Q01101 510 aaPredicted RBP8.53□□□□□ -1.04
LINC00838-201ENST00000562956 RPL18Q07020 188 aaKnown RBP8.53□□□□□ -1.04
LINC00838-201ENST00000562956 C17orf67Q0P5P2 114 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 TPBGQ13641 420 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 ALG10Q5BKT4 473 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 ARSKQ6UWY0 536 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 FAM122BQ7Z309 247 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 GRINAQ7Z429 371 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 MISPQ8IVT2 679 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 OR6Q1Q8NGQ2 317 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 OR52N1Q8NH53 320 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 MCFD2Q8NI22 146 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 RNF138Q8WVD3 245 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 ZMYND19Q96E35 227 aaPredicted RBP8.53□□□□□ -1.04
LINC00838-201ENST00000562956 Q96M85 177 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms