RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 JAM3Q9BX67 310 aa12.49□□□□□ -0.41
TPM1-215ENST00000558868 POTEKPQ9BYX7 375 aa12.49□□□□□ -0.41
TPM1-215ENST00000558868 GPN2Q9H9Y4 310 aaPredicted RBP12.49□□□□□ -0.41
TPM1-215ENST00000558868 SH2D2AQ9NP31 389 aa12.49□□□□□ -0.41
TPM1-215ENST00000558868 ABI3Q9P2A4 366 aa12.49□□□□□ -0.41
TPM1-215ENST00000558868 ENPP5Q9UJA9 477 aa12.49□□□□□ -0.41
TPM1-215ENST00000558868 CORINQ9Y5Q5 1042 aa12.49□□□□□ -0.41
TPM1-215ENST00000558868 FRYLO94915 3013 aa12.49□□□□□ -0.41
TPM1-215ENST00000558868 TMEM129A0AVI4 362 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 CDRT15L2A8MXV6 281 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 OR6A2O95222 327 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 TXNDC12O95881 172 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 PTHP01270 115 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 P04436 131 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 F8A1P23610 371 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 AQP2P41181 271 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 CLK1P49759 484 aaKnown RBP12.48□□□□□ -0.41
TPM1-215ENST00000558868 CTXN1P60606 82 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 LTBQ06643 244 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 Q0VFX4 171 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 IL10RAQ13651 578 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 ATP1A4Q13733 1029 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 SGCBQ16585 318 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 PLPPR5Q32ZL2 321 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 ACER2Q5QJU3 275 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 P2RY8Q86VZ1 359 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 JAZF1Q86VZ6 243 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 NANOGP1Q8N7R0 232 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 SLC37A3Q8NCC5 494 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 OR52E2Q8NGJ4 325 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 OR5J2Q8NH18 312 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 MOSPD2Q8NHP6 518 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 MFSD8Q8NHS3 518 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 ADAMTS17Q8TE56 1095 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 SLC25A43Q8WUT9 341 aaPredicted RBP12.48□□□□□ -0.41
TPM1-215ENST00000558868 C1GALT1C1Q96EU7 318 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 KATNB1Q9BVA0 655 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 ASH1LQ9NR48 2969 aaKnown RBP12.48□□□□□ -0.41
TPM1-215ENST00000558868 INPP5EQ9NRR6 644 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 SACM1LQ9NTJ5 587 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 TNFRSF10DQ9UBN6 386 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 VDAC3Q9Y277 283 aa12.48□□□□□ -0.41
TPM1-215ENST00000558868 FAM183AA6NL82 134 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 H3BMQ9 156 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 SNPHO15079 494 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 GABARAPO95166 117 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 HIST1H1CP16403 213 aaKnown RBP12.47□□□□□ -0.41
TPM1-215ENST00000558868 CD36P16671 472 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 GTF2E2P29084 291 aaKnown RBP12.47□□□□□ -0.41
TPM1-215ENST00000558868 SDHAP31040 664 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 CASRP41180 1078 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 RPS7P62081 194 aaKnown RBP12.47□□□□□ -0.41
TPM1-215ENST00000558868 ERVK-25P63136 954 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 RPL18Q07020 188 aaKnown RBP12.47□□□□□ -0.41
TPM1-215ENST00000558868 FOXF1Q12946 379 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 AIMP2Q13155 320 aaKnown RBP12.47□□□□□ -0.41
TPM1-215ENST00000558868 CRMP1Q14194 572 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 SPHARQ15513 63 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 MED22Q15528 200 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 KLHL12Q53G59 568 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 ARMCX4Q5H9R4 360 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 SLC35D3Q5M8T2 416 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 ZNF362Q5T0B9 420 aaPredicted RBP12.47□□□□□ -0.41
TPM1-215ENST00000558868 ARSKQ6UWY0 536 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 IGFN1Q86VF2 1251 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 SCAIQ8N9R8 606 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 WDSUB1Q8N9V3 476 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 LRRC75AQ8NAA5 344 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 OR9Q1Q8NGQ5 310 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 OR1J4Q8NGS1 313 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 ADAMTS14Q8WXS8 1223 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 PTP4A1Q93096 173 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 SLC25A36Q96CQ1 311 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 NTNG2Q96CW9 530 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 TMEM41AQ96HV5 264 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 THOC3Q96J01 351 aaKnown RBP12.47□□□□□ -0.41
TPM1-215ENST00000558868 MGLLQ99685 303 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 PTDSS2Q9BVG9 487 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 ISYNA1Q9NPH2 558 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 MRPL39Q9NYK5 338 aaKnown RBP12.47□□□□□ -0.41
TPM1-215ENST00000558868 HAO2Q9NYQ3 351 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 GRHPRQ9UBQ7 328 aa12.47□□□□□ -0.41
TPM1-215ENST00000558868 EP300Q09472 2414 aaPredicted RBP12.47□□□□□ -0.41
TPM1-215ENST00000558868 ZFYVE26Q68DK2 2539 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 ZC3H12DA2A288 527 aaKnown RBP12.46□□□□□ -0.41
TPM1-215ENST00000558868 TRIM64BA6NI03 449 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 TM4SF5O14894 197 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 SLC22A1O15245 554 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 TRIM3O75382 744 aaPredicted RBP12.46□□□□□ -0.41
TPM1-215ENST00000558868 DXOO77932 396 aaKnown RBP12.46□□□□□ -0.41
TPM1-215ENST00000558868 IGHA1P01876 353 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 CCL3P10147 92 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 TFPIP10646 304 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 GRPRP30550 384 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 IDUAP35475 653 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 CAPZA2P47755 286 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 CYB561P49447 251 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 NOVA1P51513 510 aaKnown RBP12.46□□□□□ -0.41
TPM1-215ENST00000558868 SLC25A1P53007 311 aa12.46□□□□□ -0.41
TPM1-215ENST00000558868 DSCR4P56555 118 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms