RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 CDRT4Q8N9R6 151 aa7.47□□□□□ -1.21
PACS1-213ENST00000533756 TMEM234Q8WY98 164 aa7.47□□□□□ -1.21
PACS1-213ENST00000533756 UBXN10Q96LJ8 280 aa7.47□□□□□ -1.21
PACS1-213ENST00000533756 TRIM5Q9C035 493 aa7.47□□□□□ -1.21
PACS1-213ENST00000533756 HOXD1Q9GZZ0 328 aa7.47□□□□□ -1.21
PACS1-213ENST00000533756 LMBRD1Q9NUN5 540 aa7.47□□□□□ -1.21
PACS1-213ENST00000533756 TMEM181Q9P2C4 612 aa7.47□□□□□ -1.21
PACS1-213ENST00000533756 FZR1Q9UM11 496 aa7.47□□□□□ -1.21
PACS1-213ENST00000533756 NPTNQ9Y639 398 aa7.47□□□□□ -1.21
PACS1-213ENST00000533756 USH1CQ9Y6N9 552 aa7.47□□□□□ -1.21
PACS1-213ENST00000533756 STARD9Q9P2P6 4700 aa7.46□□□□□ -1.21
PACS1-213ENST00000533756 IGLV3-9A0A075B6K5 115 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 IGHV2-70DA0A0C4DH43 119 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 KIR2DS1A0A191URI9 304 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 HMX2A2RU54 273 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 SUPT3HB4E1H0 165 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 F5H0A9 414 aaPredicted RBP7.46□□□□□ -1.22
PACS1-213ENST00000533756 RNASEK-C17orf49H0YIS7 233 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 DNAJA2O60884 412 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 SUPT3HO75486 399 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 SKAP2O75563 359 aaPredicted RBP7.46□□□□□ -1.22
PACS1-213ENST00000533756 RSL1D1O76021 490 aaKnown RBP7.46□□□□□ -1.22
PACS1-213ENST00000533756 UBOX5O94941 541 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 TGDSO95455 350 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 DUS4LO95620 317 aaKnown RBP7.46□□□□□ -1.22
PACS1-213ENST00000533756 IGHV2-70P01814 119 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 SBK2P0C263 348 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 BCKDHAP12694 445 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 UQCRC2P22695 453 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 GABRA5P31644 462 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 APOBEC1P41238 236 aaKnown RBP7.46□□□□□ -1.22
PACS1-213ENST00000533756 EFNB2P52799 333 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 OR2B6P58173 313 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 SEC61A1P61619 476 aaKnown RBP7.46□□□□□ -1.22
PACS1-213ENST00000533756 SLC35A1P78382 337 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 ZNF763Q0D2J5 394 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 MERTKQ12866 999 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 IFT88Q13099 833 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 GTF2H2Q13888 395 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 MOGQ16653 247 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 KCTD19Q17RG1 926 aaPredicted RBP7.46□□□□□ -1.22
PACS1-213ENST00000533756 NSUN5P1Q3KNT7 163 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 NKAPLQ5M9Q1 402 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 RNASEH2BQ5TBB1 312 aaKnown RBP7.46□□□□□ -1.22
PACS1-213ENST00000533756 TTC19Q6DKK2 380 aaPredicted RBP7.46□□□□□ -1.22
PACS1-213ENST00000533756 GTF2H2CQ6P1K8 395 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 C6orf89Q6UWU4 347 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 LRIG3Q6UXM1 1119 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 ISCA2Q86U28 154 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 C1orf52Q8N6N3 182 aaKnown RBP7.46□□□□□ -1.22
PACS1-213ENST00000533756 PAPD5Q8NDF8 572 aaKnown RBP7.46□□□□□ -1.22
PACS1-213ENST00000533756 CPEB3Q8NE35 698 aaKnown RBP7.46□□□□□ -1.22
PACS1-213ENST00000533756 RAB40AQ8WXH6 277 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 DACT3Q96B18 629 aaPredicted RBP7.46□□□□□ -1.22
PACS1-213ENST00000533756 NEURL3Q96EH8 262 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 TSPAN17Q96FV3 270 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 ZNF385AQ96PM9 386 aaKnown RBP7.46□□□□□ -1.22
PACS1-213ENST00000533756 ATOH8Q96SQ7 321 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 SF3B5Q9BWJ5 86 aaKnown RBP7.46□□□□□ -1.22
PACS1-213ENST00000533756 CNTD2Q9H8S5 307 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 BRF2Q9HAW0 419 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 LRCH1Q9Y2L9 728 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 PSAT1Q9Y617 370 aa7.46□□□□□ -1.22
PACS1-213ENST00000533756 ZNF503-AS2A6NEH8 195 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 RPL36A-HNRNPH2H7BZ11 118 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 UBXN8O00124 270 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 ANKRD28O15084 1053 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 ZNF264O43296 627 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 ANGPTL7O43827 346 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 KRT14P02533 472 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 MT-ND5P03915 603 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 MAKP20794 623 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 IVDP26440 423 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 KLF3P57682 345 aaPredicted RBP7.45□□□□□ -1.22
PACS1-213ENST00000533756 SESN3P58005 492 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 ARF1P84077 181 aaKnown RBP7.45□□□□□ -1.22
PACS1-213ENST00000533756 PRAMEF8Q5VWM4 474 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 PRAMEF7Q5VXH5 474 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 RGS7BPQ6MZT1 257 aaPredicted RBP7.45□□□□□ -1.22
PACS1-213ENST00000533756 METTL2BQ6P1Q9 378 aaKnown RBP7.45□□□□□ -1.22
PACS1-213ENST00000533756 TRMT10BQ6PF06 316 aaKnown RBP7.45□□□□□ -1.22
PACS1-213ENST00000533756 LINGO2Q7L985 606 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 GOLGA7Q7Z5G4 137 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 LRRC28Q86X40 367 aaPredicted RBP7.45□□□□□ -1.22
PACS1-213ENST00000533756 SPERTQ8NA61 448 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 OR9K2Q8NGE7 335 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 RFWD2Q8NHY2 731 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 MGARPQ8TDB4 240 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 MAIP1Q8WWC4 291 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 THOC1Q96FV9 657 aaKnown RBP7.45□□□□□ -1.22
PACS1-213ENST00000533756 ALKBH3Q96Q83 286 aaPredicted RBP7.45□□□□□ -1.22
PACS1-213ENST00000533756 LINC00470Q9BZP3 86 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 LACRTQ9GZZ8 138 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 RHOJQ9H4E5 214 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 GLIPR2Q9H4G4 154 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 ELOVL6Q9H5J4 265 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 ALG9Q9H6U8 611 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 EQTNQ9NQ60 294 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 ACER3Q9NUN7 267 aa7.45□□□□□ -1.22
PACS1-213ENST00000533756 ACOXLQ9NUZ1 547 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms