RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TNFRSF13CQ96RJ3 184 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 INSM2Q96T92 566 aaPredicted RBP16.29■□□□□ 0.2
NUP54-205ENST00000507257 STACQ99469 402 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 MFFQ9GZY8 342 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 SLITRK2Q9H156 845 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 SLC6A17Q9H1V8 727 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 POLE3Q9NRF9 147 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 HPF1Q9NWY4 346 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 NDRG3Q9UGV2 375 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 ATPIF1Q9UII2 106 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 SLC27A6Q9Y2P4 619 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 SLC6A5Q9Y345 797 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 A0A0D9SG52 128 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 H3BUI4 141 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 NUPL2O15504 423 aaKnown RBP16.29■□□□□ 0.2
NUP54-205ENST00000507257 XRCC3O43542 346 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 RBBP9O75884 186 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 AGTR1P30556 359 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 SSBP1Q04837 148 aaKnown RBP16.29■□□□□ 0.2
NUP54-205ENST00000507257 ELAVL3Q14576 367 aaKnown RBP16.29■□□□□ 0.2
NUP54-205ENST00000507257 PON3Q15166 354 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 IRF4Q15306 451 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 ISXQ2M1V0 245 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 CLVS2Q5SYC1 327 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 DCST2Q5T1A1 773 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 SERPINA12Q8IW75 414 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 OR2L3Q8NG85 312 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 OR52E2Q8NGJ4 325 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 OR52B4Q8NGK2 314 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 EDAQ92838 391 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 LRRC46Q96FV0 321 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 MYADMQ96S97 322 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 MACROD1Q9BQ69 325 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 BARX1Q9HBU1 254 aaPredicted RBP16.29■□□□□ 0.2
NUP54-205ENST00000507257 TM7SF3Q9NS93 570 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 C2orf42Q9NWW7 574 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 C19orf53Q9UNZ5 99 aaPredicted RBP16.29■□□□□ 0.2
NUP54-205ENST00000507257 PLCL2Q9UPR0 1127 aa16.29■□□□□ 0.2
NUP54-205ENST00000507257 MUC22E2RYF6 1773 aaPredicted RBP16.28■□□□□ 0.2
NUP54-205ENST00000507257 EDDM13A0A1B0GTR0 161 aa16.28■□□□□ 0.2
NUP54-205ENST00000507257 EIF4E2O60573 245 aaKnown RBP16.28■□□□□ 0.2
NUP54-205ENST00000507257 MOSPD3O75425 235 aa16.28■□□□□ 0.2
NUP54-205ENST00000507257 NDUFB2O95178 105 aa16.28■□□□□ 0.2
NUP54-205ENST00000507257 MAOBP27338 520 aa16.28■□□□□ 0.2
NUP54-205ENST00000507257 HCCSP53701 268 aa16.28■□□□□ 0.2
NUP54-205ENST00000507257 GPR162Q16538 588 aa16.28■□□□□ 0.2
NUP54-205ENST00000507257 C2orf68Q2NKX9 166 aa16.28■□□□□ 0.2
NUP54-205ENST00000507257 HNRNPA1L2Q32P51 320 aaKnown RBP16.28■□□□□ 0.2
NUP54-205ENST00000507257 ZNF684Q5T5D7 378 aa16.28■□□□□ 0.2
NUP54-205ENST00000507257 ZNF425Q6IV72 752 aa16.28■□□□□ 0.2
NUP54-205ENST00000507257 FAAP20Q6NZ36 180 aa16.28■□□□□ 0.2
NUP54-205ENST00000507257 UQCC3Q6UW78 93 aa16.28■□□□□ 0.2
NUP54-205ENST00000507257 USP53Q70EK8 1073 aa16.28■□□□□ 0.2
NUP54-205ENST00000507257 ZNF433Q8N7K0 673 aaPredicted RBP16.28■□□□□ 0.2
NUP54-205ENST00000507257 OR4K14Q8NGD5 310 aa16.28■□□□□ 0.2
NUP54-205ENST00000507257 RAB7BQ96AH8 199 aa16.28■□□□□ 0.2
NUP54-205ENST00000507257 ZBP1Q9H171 429 aa16.28■□□□□ 0.2
NUP54-205ENST00000507257 SLC25A18Q9H1K4 315 aa16.28■□□□□ 0.2
NUP54-205ENST00000507257 C1orf198Q9H425 327 aa16.28■□□□□ 0.2
NUP54-205ENST00000507257 KCNE5Q9UJ90 142 aa16.28■□□□□ 0.2
NUP54-205ENST00000507257 A0A087WV62 115 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 ACOD1A6NK06 481 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 GOSR2O14653 212 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 MAGEB4O15481 346 aaPredicted RBP16.27■□□□□ 0.2
NUP54-205ENST00000507257 STATHP02808 62 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 RLN2P04090 185 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 CBX5P45973 191 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 ERVFC1P60507 584 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 S100A12P80511 92 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 ZNF345Q14585 488 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 TEAD2Q15562 447 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 FHL5Q5TD97 284 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 STAC2Q6ZMT1 411 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 C17orf107Q6ZR85 190 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 MTSS1LQ765P7 747 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 MUC20Q8N307 709 aaPredicted RBP16.27■□□□□ 0.2
NUP54-205ENST00000507257 ARL14Q8N4G2 192 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 KREMEN2Q8NCW0 462 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 C7orf57Q8NEG2 295 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 OR4C16Q8NGL9 310 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 HMGB4Q8WW32 186 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 ST8SIA2Q92186 375 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 RGP1Q92546 391 aaPredicted RBP16.27■□□□□ 0.2
NUP54-205ENST00000507257 TCEAL4Q96EI5 215 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 PHYHIPLQ96FC7 376 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 ABT1Q9ULW3 272 aaKnown RBP16.27■□□□□ 0.2
NUP54-205ENST00000507257 WNT6Q9Y6F9 365 aa16.27■□□□□ 0.2
NUP54-205ENST00000507257 ARPC4-TTLL3A0A0A6YYG9 625 aa16.27■□□□□ 0.19
NUP54-205ENST00000507257 HIST1H1CP16403 213 aaKnown RBP16.27■□□□□ 0.19
NUP54-205ENST00000507257 CSRP1P21291 193 aaKnown RBP16.27■□□□□ 0.19
NUP54-205ENST00000507257 MST1P26927 711 aa16.27■□□□□ 0.19
NUP54-205ENST00000507257 SRSF4Q08170 494 aaKnown RBP16.27■□□□□ 0.19
NUP54-205ENST00000507257 Q499Y3 187 aa16.27■□□□□ 0.19
NUP54-205ENST00000507257 ANKRD33Q7Z3H0 272 aa16.27■□□□□ 0.19
NUP54-205ENST00000507257 NMNAT2Q9BZQ4 307 aa16.27■□□□□ 0.19
NUP54-205ENST00000507257 NKX6-2Q9C056 277 aaPredicted RBP16.27■□□□□ 0.19
NUP54-205ENST00000507257 MYOZ1Q9NP98 299 aaPredicted RBP16.27■□□□□ 0.19
NUP54-205ENST00000507257 GMEB2Q9UKD1 530 aa16.27■□□□□ 0.19
NUP54-205ENST00000507257 NUMA1Q14980 2115 aa16.26■□□□□ 0.19
NUP54-205ENST00000507257 TRBV5-5A0A0J9YX44 114 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms