RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 BMP4P12644 408 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 FOSL1P15407 271 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 HOXB9P17482 250 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-232ENST00000489053 COX5AP20674 150 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 CD247P20963 164 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 PTAFRP25105 342 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 MPGP29372 298 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 IFNA8P32881 189 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 PCGF2P35227 344 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 ATP5J2P56134 94 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 PRPS1P60891 318 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 ADAM8P78325 824 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 GUCY1A3Q02108 690 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 SLC17A1Q14916 467 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 OR1Q1Q15612 314 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 NCMAPQ5T1S8 102 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 FAM69AQ5T7M9 428 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 NIPAL3Q6P499 406 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 DLEU7Q6UYE1 221 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 C22orf34Q6ZV56 151 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 YTHDF3Q7Z739 585 aaKnown RBP8.05□□□□□ -1.12
HDAC6-232ENST00000489053 UEVLDQ8IX04 471 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 GPR137CQ8N3F9 429 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 C17orf78Q8N4C9 275 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 C1orf162Q8NEQ5 155 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-232ENST00000489053 WFDC11Q8NEX6 87 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 OR10A6Q8NH74 314 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 VANGL1Q8TAA9 524 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-232ENST00000489053 SMAP2Q8WU79 429 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-232ENST00000489053 HS6ST2Q96MM7 605 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 FKRPQ9H9S5 495 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 B3GAT2Q9NPZ5 323 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 BAG5Q9UL15 447 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 CORINQ9Y5Q5 1042 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 PCNX3Q9H6A9 2034 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 TRBV5-3A0A0A0MS03 114 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 A0A1W2PR80 420 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 TMEM229AB2RXF0 380 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 M0QX08 132 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 M0R082 166 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 FMO6PO60774 539 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 SERPINI2O75830 405 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 PLAUP00749 431 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 NPPAP01160 153 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 HIST1H2ABP04908 130 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 C8BP07358 591 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 UMPSP11172 480 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 CBLP22681 906 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 AHCYP23526 432 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 GRPRP30550 384 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 CAPZA2P47755 286 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 SH3BGRP55822 239 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-232ENST00000489053 CLDN17P56750 224 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 KLF10Q13118 480 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 PMS2P3Q13401 168 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 ZNF672Q499Z4 452 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-232ENST00000489053 COQ5Q5HYK3 327 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 SWT1Q5T5J6 900 aaKnown RBP8.04□□□□□ -1.12
HDAC6-232ENST00000489053 TSPO2Q5TGU0 170 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 AGAP6Q5VW22 663 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 ERICH5Q6P6B1 374 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 CREB3L2Q70SY1 520 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 H1FNTQ75WM6 255 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-232ENST00000489053 HIST3H2AQ7L7L0 130 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 SNX32Q86XE0 403 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 FBXL14Q8N1E6 418 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 LSMEM1Q8N8F7 131 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 KBTBD8Q8NFY9 601 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 OR8J3Q8NGG0 315 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 ZNF417Q8TAU3 575 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 HIST1H2ACQ93077 130 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 LRRC58Q96CX6 371 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 KTI12Q96EK9 354 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-232ENST00000489053 Q96MF0 132 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 OXGR1Q96P68 337 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 ZNF587Q96SQ5 575 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-232ENST00000489053 MCHR1Q99705 422 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 BDH2Q9BUT1 245 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 TMUB1Q9BVT8 246 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 C1QTNF6Q9BXI9 259 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 NSRP1Q9H0G5 558 aaKnown RBP8.04□□□□□ -1.12
HDAC6-232ENST00000489053 IKZF5Q9H5V7 419 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 KAT8Q9H7Z6 458 aaKnown RBP8.04□□□□□ -1.12
HDAC6-232ENST00000489053 MOV10Q9HCE1 1003 aaKnown RBP8.04□□□□□ -1.12
HDAC6-232ENST00000489053 SLC52A3Q9NQ40 469 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 SLC7A10Q9NS82 523 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 CISD1Q9NZ45 108 aaKnown RBP8.04□□□□□ -1.12
HDAC6-232ENST00000489053 KLHL14Q9P2G3 628 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 B3GALT5Q9Y2C3 310 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 GMEB1Q9Y692 573 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 ATP23Q9Y6H3 246 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 ROS1P08922 2347 aa8.04□□□□□ -1.12
HDAC6-232ENST00000489053 ACANP16112 2415 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 A0A0B4J2E0 115 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 LOC100653049A0A140TA62 436 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 A0A1B0GX12 115 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 CPSF4LA6NMK7 179 aaKnown RBP8.03□□□□□ -1.12
HDAC6-232ENST00000489053 ZNF726A6NNF4 738 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 M0R3H8 397 aa8.03□□□□□ -1.12
HDAC6-232ENST00000489053 SMAD7O15105 426 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms