RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 LGI1O95970 557 aa19.85■□□□□ 0.77
USP42-205ENST00000465073 CRYAAP02489 173 aa19.85■□□□□ 0.77
USP42-205ENST00000465073 ZCCHC18P0CG32 403 aa19.85■□□□□ 0.77
USP42-205ENST00000465073 ETFAP13804 333 aa19.85■□□□□ 0.77
USP42-205ENST00000465073 IDO1P14902 403 aa19.85■□□□□ 0.77
USP42-205ENST00000465073 ZNF16P17020 682 aaPredicted RBP19.85■□□□□ 0.77
USP42-205ENST00000465073 THBS2P35442 1172 aa19.85■□□□□ 0.77
USP42-205ENST00000465073 CRATP43155 626 aa19.85■□□□□ 0.77
USP42-205ENST00000465073 UBE2NP61088 152 aaKnown RBP19.85■□□□□ 0.77
USP42-205ENST00000465073 HHATQ5VTY9 493 aa19.85■□□□□ 0.77
USP42-205ENST00000465073 CLIP4Q8N3C7 705 aa19.85■□□□□ 0.77
USP42-205ENST00000465073 SLC38A5Q8WUX1 472 aa19.85■□□□□ 0.77
USP42-205ENST00000465073 BCL2L2Q92843 193 aaPredicted RBP19.85■□□□□ 0.77
USP42-205ENST00000465073 CACYBPQ9HB71 228 aaKnown RBP19.85■□□□□ 0.77
USP42-205ENST00000465073 MOV10Q9HCE1 1003 aaKnown RBP19.85■□□□□ 0.77
USP42-205ENST00000465073 SLC6A13Q9NSD5 602 aa19.85■□□□□ 0.77
USP42-205ENST00000465073 THUMPD1Q9NXG2 353 aaKnown RBP19.85■□□□□ 0.77
USP42-205ENST00000465073 FRS3O43559 492 aa19.84■□□□□ 0.77
USP42-205ENST00000465073 NPIPB7O75200 414 aa19.84■□□□□ 0.77
USP42-205ENST00000465073 SLC22A3O75751 556 aa19.84■□□□□ 0.77
USP42-205ENST00000465073 BCHEP06276 602 aa19.84■□□□□ 0.77
USP42-205ENST00000465073 NCF2P19878 526 aaPredicted RBP19.84■□□□□ 0.77
USP42-205ENST00000465073 SELENOPP49908 381 aa19.84■□□□□ 0.77
USP42-205ENST00000465073 DSTNP60981 165 aa19.84■□□□□ 0.77
USP42-205ENST00000465073 C3orf36Q3SXR2 165 aa19.84■□□□□ 0.77
USP42-205ENST00000465073 CEP85LQ5SZL2 805 aa19.84■□□□□ 0.77
USP42-205ENST00000465073 PRAMEF8Q5VWM4 474 aa19.84■□□□□ 0.77
USP42-205ENST00000465073 PRAMEF7Q5VXH5 474 aa19.84■□□□□ 0.77
USP42-205ENST00000465073 MAGEE2Q8TD90 523 aaPredicted RBP19.84■□□□□ 0.77
USP42-205ENST00000465073 STK35Q8TDR2 534 aa19.84■□□□□ 0.77
USP42-205ENST00000465073 SORCS2Q96PQ0 1159 aa19.84■□□□□ 0.77
USP42-205ENST00000465073 PIMREGQ9BSJ6 248 aa19.84■□□□□ 0.77
USP42-205ENST00000465073 MYOZ1Q9NP98 299 aaPredicted RBP19.84■□□□□ 0.77
USP42-205ENST00000465073 CA10Q9NS85 328 aa19.84■□□□□ 0.77
USP42-205ENST00000465073 THAP1Q9NVV9 213 aa19.84■□□□□ 0.77
USP42-205ENST00000465073 ARPC4-TTLL3A0A0A6YYG9 625 aa19.83■□□□□ 0.76
USP42-205ENST00000465073 A0A0G2JPF8 293 aa19.83■□□□□ 0.76
USP42-205ENST00000465073 HNRNPCL2B2RXH8 293 aa19.83■□□□□ 0.76
USP42-205ENST00000465073 HNRNPCL3B7ZW38 293 aa19.83■□□□□ 0.76
USP42-205ENST00000465073 HNRNPCL1O60812 293 aaKnown RBP19.83■□□□□ 0.76
USP42-205ENST00000465073 ANP32DO95626 131 aa19.83■□□□□ 0.76
USP42-205ENST00000465073 HNRNPCL4P0DMR1 293 aa19.83■□□□□ 0.76
USP42-205ENST00000465073 PRG2P13727 222 aa19.83■□□□□ 0.76
USP42-205ENST00000465073 NR4A2P43354 598 aa19.83■□□□□ 0.76
USP42-205ENST00000465073 LGALS3BPQ08380 585 aa19.83■□□□□ 0.76
USP42-205ENST00000465073 PDCD4Q53EL6 469 aaKnown RBP19.83■□□□□ 0.76
USP42-205ENST00000465073 ANKRD16Q6P6B7 361 aa19.83■□□□□ 0.76
USP42-205ENST00000465073 SLC46A3Q7Z3Q1 461 aa19.83■□□□□ 0.76
USP42-205ENST00000465073 EPHX4Q8IUS5 362 aa19.83■□□□□ 0.76
USP42-205ENST00000465073 SPATA9Q9BWV2 254 aa19.83■□□□□ 0.76
USP42-205ENST00000465073 LINC00470Q9BZP3 86 aa19.83■□□□□ 0.76
USP42-205ENST00000465073 TPT1P8Q9HAU6 139 aa19.83■□□□□ 0.76
USP42-205ENST00000465073 CRNNQ9UBG3 495 aaPredicted RBP19.83■□□□□ 0.76
USP42-205ENST00000465073 IFT52Q9Y366 437 aa19.83■□□□□ 0.76
USP42-205ENST00000465073 ARFGEF3Q5TH69 2177 aa19.83■□□□□ 0.76
USP42-205ENST00000465073 LOC390937A0A1W2PQ73 354 aa19.82■□□□□ 0.76
USP42-205ENST00000465073 TMEM247A6NEH6 219 aa19.82■□□□□ 0.76
USP42-205ENST00000465073 B9A039 149 aa19.82■□□□□ 0.76
USP42-205ENST00000465073 SLCO1B7G3V0H7 640 aa19.82■□□□□ 0.76
USP42-205ENST00000465073 PDE5AO76074 875 aa19.82■□□□□ 0.76
USP42-205ENST00000465073 HOXB1P14653 301 aaPredicted RBP19.82■□□□□ 0.76
USP42-205ENST00000465073 SH3BGRP55822 239 aaPredicted RBP19.82■□□□□ 0.76
USP42-205ENST00000465073 GGTLC2Q14390 218 aa19.82■□□□□ 0.76
USP42-205ENST00000465073 NXNQ6DKJ4 435 aa19.82■□□□□ 0.76
USP42-205ENST00000465073 FAM166AQ6J272 317 aa19.82■□□□□ 0.76
USP42-205ENST00000465073 NIPAL3Q6P499 406 aa19.82■□□□□ 0.76
USP42-205ENST00000465073 CROCCP2Q86T23 111 aa19.82■□□□□ 0.76
USP42-205ENST00000465073 FAM169BQ8N8A8 192 aa19.82■□□□□ 0.76
USP42-205ENST00000465073 MFSD8Q8NHS3 518 aa19.82■□□□□ 0.76
USP42-205ENST00000465073 C3orf49Q96BT1 292 aa19.82■□□□□ 0.76
USP42-205ENST00000465073 ITCHQ96J02 903 aa19.82■□□□□ 0.76
USP42-205ENST00000465073 ALKBH3Q96Q83 286 aaPredicted RBP19.82■□□□□ 0.76
USP42-205ENST00000465073 VRK1Q99986 396 aaPredicted RBP19.82■□□□□ 0.76
USP42-205ENST00000465073 PARD6BQ9BYG5 372 aa19.82■□□□□ 0.76
USP42-205ENST00000465073 RMND5AQ9H871 391 aa19.82■□□□□ 0.76
USP42-205ENST00000465073 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.82■□□□□ 0.76
USP42-205ENST00000465073 V9GYY5 206 aaPredicted RBP19.82■□□□□ 0.76
USP42-205ENST00000465073 TMEM229AB2RXF0 380 aa19.81■□□□□ 0.76
USP42-205ENST00000465073 SNNO75324 88 aaPredicted RBP19.81■□□□□ 0.76
USP42-205ENST00000465073 AHSA1O95433 338 aa19.81■□□□□ 0.76
USP42-205ENST00000465073 NAAAQ02083 359 aa19.81■□□□□ 0.76
USP42-205ENST00000465073 MSANTD1Q6ZTZ1 278 aa19.81■□□□□ 0.76
USP42-205ENST00000465073 LINGO2Q7L985 606 aa19.81■□□□□ 0.76
USP42-205ENST00000465073 SERPINA11Q86U17 422 aa19.81■□□□□ 0.76
USP42-205ENST00000465073 ANKRD42Q8N9B4 389 aa19.81■□□□□ 0.76
USP42-205ENST00000465073 ANKK1Q8NFD2 765 aa19.81■□□□□ 0.76
USP42-205ENST00000465073 FOXN4Q96NZ1 517 aa19.81■□□□□ 0.76
USP42-205ENST00000465073 FBXO9Q9UK97 447 aaPredicted RBP19.81■□□□□ 0.76
USP42-205ENST00000465073 KCNS2Q9ULS6 477 aa19.81■□□□□ 0.76
USP42-205ENST00000465073 CHST2Q9Y4C5 530 aa19.81■□□□□ 0.76
USP42-205ENST00000465073 CUBNO60494 3623 aa19.81■□□□□ 0.76
USP42-205ENST00000465073 NR5A2O00482 541 aa19.8■□□□□ 0.76
USP42-205ENST00000465073 UPK3AO75631 287 aa19.8■□□□□ 0.76
USP42-205ENST00000465073 IGLV1-44P01699 117 aa19.8■□□□□ 0.76
USP42-205ENST00000465073 KITP10721 976 aa19.8■□□□□ 0.76
USP42-205ENST00000465073 EFNB3Q15768 340 aa19.8■□□□□ 0.76
USP42-205ENST00000465073 ADIPOQQ15848 244 aa19.8■□□□□ 0.76
USP42-205ENST00000465073 RPS26P11Q5JNZ5 115 aaPredicted RBP19.8■□□□□ 0.76
USP42-205ENST00000465073 ARIH2OSQ8N7S6 290 aa19.8■□□□□ 0.76
USP42-205ENST00000465073 ZNF540Q8NDQ6 660 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms