RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 M0R233 179 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 TMPRSS11DO60235 418 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 SKAP2O75563 359 aaPredicted RBP4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 CECR9P0C854 216 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 RBMY1A1P0DJD3 496 aaKnown RBP4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 ZNF10P21506 573 aaPredicted RBP4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 HIST1H1TP22492 207 aaPredicted RBP4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 PSMB4P28070 264 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 PPARGP37231 505 aaPredicted RBP4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 ALDH3B1P43353 468 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 MAGEB1P43366 347 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 PPICP45877 212 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 TTPAP49638 278 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 PRPS1P60891 318 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 PLCXD2Q0VAA5 305 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 KLF10Q13118 480 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 CSHL1Q14406 222 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 RBBP5Q15291 538 aaKnown RBP4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 TRIP13Q15645 432 aaPredicted RBP4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 MMEL1Q495T6 779 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 CPTPQ5TA50 214 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 C18orf63Q68DL7 685 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 REP15Q6BDI9 236 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 Q6ZWC4 215 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 MYPOPQ86VE0 399 aaPredicted RBP4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 LRP11Q86VZ4 500 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 CCDC28AQ8IWP9 274 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 SLC5A11Q8WWX8 675 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 LPGAT1Q92604 370 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 KCNJ9Q92806 393 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 MUL1Q969V5 352 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 CPNE4Q96A23 557 aaPredicted RBP4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 KLHDC3Q9BQ90 382 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 TM2D3Q9BRN9 247 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 PELOQ9BRX2 385 aaKnown RBP4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 LRRC1Q9BTT6 524 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 ITPAQ9BY32 194 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 ISCUQ9H1K1 167 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 C10orf88Q9H8K7 445 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 DUSP22Q9NRW4 184 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 ASB6Q9NWX5 421 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 MYEF2Q9P2K5 600 aaKnown RBP4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 LIMA1Q9UHB6 759 aaKnown RBP4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 GLS2Q9UI32 602 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 ZNF639Q9UID6 485 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 RWDD2AQ9UIY3 292 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 DMRT1Q9Y5R6 373 aa4.28□□□□□ -1.72
SBDSP1-204ENST00000453858 SORL1Q92673 2214 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 IGKV3D-15A0A087WSY6 115 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 A0A087WV62 115 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 IGHV3-15A0A0B4J1V0 119 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 SDR42E2A6NKP2 422 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 LINC00473A8K010 186 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 CYTIPO60759 359 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 DEDDO75618 318 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 MPC1LP0DKB6 136 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 CT45A8P0DMV1 189 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 CT45A9P0DMV2 189 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 EVI2BP34910 448 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 MAGEA8P43361 318 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 EMDP50402 254 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 ELLP55199 621 aaPredicted RBP4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 CDH17Q12864 832 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 MAD2L1BPQ15013 274 aaPredicted RBP4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 CT45A2Q5DJT8 189 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 TECRLQ5HYJ1 363 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 TSTD2Q5T7W7 516 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 ABLIM2Q6H8Q1 611 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 PTCHD4Q6ZW05 846 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 GALNT5Q7Z7M9 940 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 ZNF100Q8IYN0 542 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 ZNF101Q8IZC7 436 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 MUC20Q8N307 709 aaPredicted RBP4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 MAPKAPK5-AS1Q8N8E1 139 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 CEP112Q8N8E3 955 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 OR52E4Q8NGH9 312 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 VPS39Q96JC1 886 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 KLHL15Q96M94 604 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 QKIQ96PU8 341 aaKnown RBP eCLIP4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 F2RL3Q96RI0 385 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 NAP1L3Q99457 506 aaPredicted RBP4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 AIF1LQ9BQI0 150 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 RHOXF2Q9BQY4 288 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 MYLK2Q9H1R3 596 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 TMEM185BQ9H7F4 350 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 COQ10BQ9H8M1 238 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 PELI2Q9HAT8 420 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 SAYSD1Q9NPB0 183 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 FLRT3Q9NZU0 649 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 KLHL9Q9P2J3 617 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 ZNF490Q9ULM2 529 aaPredicted RBP4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 DTNAQ9Y4J8 743 aa4.27□□□□□ -1.73
SBDSP1-204ENST00000453858 CENPVL3A0A0U1RRI6 287 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 KIR2DS1A0A191URI9 304 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 CTAGE9A4FU28 777 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 F5H0A9 414 aaPredicted RBP4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 RTCAO00442 366 aaKnown RBP4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 RAMP3O60896 148 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 PROP1O75360 226 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 IGKV3-15P01624 115 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms