RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 IGHMP01871 453 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 CATP04040 527 aaKnown RBP4.04□□□□□ -1.76
SDCBP-205ENST00000447267 CHRM4P08173 479 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 VIMP08670 466 aaKnown RBP4.04□□□□□ -1.76
SDCBP-205ENST00000447267 TROVE2P10155 538 aaKnown RBP eCLIP4.04□□□□□ -1.76
SDCBP-205ENST00000447267 IDO1P14902 403 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 KDELR1P24390 212 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 PSMB4P28070 264 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 GALNSP34059 522 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 RPL22P35268 128 aaKnown RBP4.04□□□□□ -1.76
SDCBP-205ENST00000447267 CARD18P57730 90 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 MRPL28Q13084 256 aaKnown RBP4.04□□□□□ -1.76
SDCBP-205ENST00000447267 STX5Q13190 355 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 POU6F1Q14863 301 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 EFTUD2Q15029 972 aaKnown RBP eCLIP4.04□□□□□ -1.76
SDCBP-205ENST00000447267 ALKBH6Q3KRA9 238 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 ZIK1Q3SY52 487 aaPredicted RBP4.04□□□□□ -1.76
SDCBP-205ENST00000447267 CTSL3PQ5NE16 218 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 PHYHD1Q5SRE7 291 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 ASPHD1Q5U4P2 390 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 MORN5Q5VZ52 161 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 PTRHD1Q6GMV3 140 aaKnown RBP4.04□□□□□ -1.76
SDCBP-205ENST00000447267 CAVIN1Q6NZI2 390 aaKnown RBP4.04□□□□□ -1.76
SDCBP-205ENST00000447267 KLHDC8BQ8IXV7 354 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 RNF128Q8TEB7 428 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 TFB1MQ8WVM0 346 aaKnown RBP4.04□□□□□ -1.76
SDCBP-205ENST00000447267 LZICQ8WZA0 190 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 RPL36ALQ969Q0 106 aaKnown RBP4.04□□□□□ -1.76
SDCBP-205ENST00000447267 CCDC126Q96EE4 140 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 PANX3Q96QZ0 392 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 ZNF300Q96RE9 604 aaPredicted RBP4.04□□□□□ -1.76
SDCBP-205ENST00000447267 KCNS3Q9BQ31 491 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 THAP7Q9BT49 309 aaPredicted RBP4.04□□□□□ -1.76
SDCBP-205ENST00000447267 KRTAP1-5Q9BYS1 174 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 MRPL37Q9BZE1 423 aaKnown RBP4.04□□□□□ -1.76
SDCBP-205ENST00000447267 SLC17A5Q9NRA2 495 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 SLC7A10Q9NS82 523 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 MARCH4Q9P2E8 410 aaPredicted RBP4.04□□□□□ -1.76
SDCBP-205ENST00000447267 SLC2A6Q9UGQ3 507 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 DAPP1Q9UN19 280 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 PDE10AQ9Y233 779 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 HEATR1Q9H583 2144 aaKnown RBP4.04□□□□□ -1.76
SDCBP-205ENST00000447267 MUC2Q02817 5179 aa4.04□□□□□ -1.76
SDCBP-205ENST00000447267 FLG2Q5D862 2391 aaPredicted RBP4.03□□□□□ -1.76
SDCBP-205ENST00000447267 OR6C65A6NJZ3 312 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 OR6C76A6NM76 312 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 ADAMDEC1O15204 470 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 SYNGR3O43761 229 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 SCO2O43819 266 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 ANXA9O76027 345 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 TBX6O95947 436 aaPredicted RBP4.03□□□□□ -1.76
SDCBP-205ENST00000447267 CRYAAP02489 173 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 SERPINA6P08185 405 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 NPPBP16860 134 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 RPS3P23396 243 aaKnown RBP eCLIP4.03□□□□□ -1.762e-6■■■□□ 17.7
SDCBP-205ENST00000447267 SHC1P29353 583 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 AHRP35869 848 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 TGFBR2P37173 567 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 BPIFB3P59826 476 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 GNB2P62879 340 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 CCL8P80075 99 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 REEP5Q00765 189 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 NAAAQ02083 359 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 PLCXD2Q0VAA5 305 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 CDH17Q12864 832 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 BNIP1Q12981 228 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 DYNC1I2Q13409 638 aaKnown RBP4.03□□□□□ -1.76
SDCBP-205ENST00000447267 NAE1Q13564 534 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 ZNF239Q16600 458 aaKnown RBP4.03□□□□□ -1.76
SDCBP-205ENST00000447267 HADHQ16836 314 aaKnown RBP4.03□□□□□ -1.76
SDCBP-205ENST00000447267 KLHL38Q2WGJ6 581 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 PCID2Q5JVF3 399 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 PPP1R2P3Q6NXS1 205 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 AFTPHQ6ULP2 937 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 MBOAT1Q6ZNC8 495 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 FCRLAQ7L513 359 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 LRP11Q86VZ4 500 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 MAP7D3Q8IWC1 876 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 KLHDC8AQ8IYD2 350 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 FADS6Q8N9I5 356 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 RBM15BQ8NDT2 890 aaKnown RBP4.03□□□□□ -1.76
SDCBP-205ENST00000447267 RNF138Q8WVD3 245 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 RIT1Q92963 219 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 MS4A6EQ96DS6 147 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 REXO5Q96IC2 774 aaKnown RBP4.03□□□□□ -1.76
SDCBP-205ENST00000447267 RITA1Q96K30 269 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 QKIQ96PU8 341 aaKnown RBP eCLIP4.03□□□□□ -1.76
SDCBP-205ENST00000447267 OR4K3Q96R72 315 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 NR1H4Q96RI1 486 aaPredicted RBP4.03□□□□□ -1.76
SDCBP-205ENST00000447267 VAT1Q99536 393 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 TBL1YQ9BQ87 522 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 UQCC2Q9BRT2 126 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 FAM167BQ9BTA0 163 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 PTDSS2Q9BVG9 487 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 PCBD2Q9H0N5 130 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 ZBTB26Q9HCK0 441 aa4.03□□□□□ -1.76
SDCBP-205ENST00000447267 MRPL47Q9HD33 250 aaKnown RBP4.03□□□□□ -1.76
SDCBP-205ENST00000447267 PPANQ9NQ55 473 aaKnown RBP4.03□□□□□ -1.76
SDCBP-205ENST00000447267 PAPOLBQ9NRJ5 636 aaKnown RBP4.03□□□□□ -1.76
SDCBP-205ENST00000447267 EXD2Q9NVH0 621 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms